| S. No | Marker Name | Sequence (5' to 3') | Product Size (bp) | Position in CP Genome (bp) |
| 1 | CP3-F | CCTTCTCGGAAAAGTATTTTCACA | 740 | 83112-83852 |
| CP3-R | CATCCTTTGCATTGGAAGAATAGA | |||
| 2 | CP4-F | GCTGAATAGACAGATTCATTGAAA | 1334 | 101265-102599 |
| CP4-R | CCAGACTCTCTTCACTAAGTGTTA | |||
| 3 | CP5?F | CTGACAATTCATTTCTATTTCTAGA | 720 | 8986-9705 |
| CP5-R | CATTATTTATCTATAATTCGTTGGA |