Bacteria | Target gene | Serogroup | Sense primers | Anti primers-sense | Probes |
N. meningitidis | sodC | (Nm) | F351: GCACACTTAGGTGAT TTACCTGCA | R478: CCACCCGTGTGGATCATA ATAGA | Pb387: CATGATGGCACAGCAA-CAAATC CTGTTT5'FAM, 3'BHQ |
csaB | NmA | F2531: AAAATTCAATGGGTATATCACGAA-GA | R2624: TATGGTGCAAG CTGGTTTCAATAG | Pb2591i: CTAAAAG- “T” AGG AAGGGCACTTTGTGGCATAAT5'FAM; 3'SpC6; “T” BHQ1 | |
csc | NmC | F478: CCCTGAGTATGCGAAAAAAATT | R551: TGCTAATCCCGCCTGAATG | Pb495i: TTTCAATGC“T” AATGAATACC- ACCGTTTTTTTGC5'FAM; 3'SpC6; “T” BHQ1 | |
csw | NmW | F857: TATTTATGGAAGGCATGGTGTATG | R964: TTGCCATTCCAGA AATATCACC | Pb907i: AAATATGGAGCGAA “T” GATTACAGTAACTATAATGAA5'FAM, 3'SpC6, “T” BHQ1, | |
csxB | NmX | F173: TGTCCCCAAC-CGTTTATTGG | R237: TGCTGCTATCATAGCCGCC | Pb196i: TGTTTGCCC-A CATGAATGGCGGFAM; 3'BHQ | |
csy | NmY | F787: TCCGAGCAGGAAATTTATGAGAATAC | R929: TTGCTAAAATCATTCGCTCCATAT | Pb1099i: TATGGTG “T-” ACGATATCCCTAT-CCTTGCCTATAAT5'FAM; 3'SpC6; “T” BHQ1 | |
H. influenzae b | hpd3 (Hi) | Hi | hpdF822: GGTTAAATATGCCGATGGTGTTG | hpdF952: TGCATCTTTACGCACGGTGTA | Pb896i: TTGTGTACACTCCGT “T” GGTAAAAGAACTTGCAC |
bcsC | Hib | F192: TGATGCATTGAAAGAAGGT-GTAATTT | R359: CCTGCGGTAATAACATGATC-ATAAA | Pb244i: TGTCGTGCAGTAGCAAACCGTAACCTTACTC | |
S. pneumoniae | lytA | (S.pn) | F373: ACGCAATCTAGCAGA TGA -AGC A | R424: TCGTGCGTTTTAATTCCAGCT | Pb400: TGCCGAAAACGC “T” TGATACAGGGAG5'FAM; “T” BHQ; 3'SpC6 |