| S. cerevisiae protein | P. pastoris protein | Query cover, % | Identity, % | Protein reference (UniProtKB/TrEMBL) | Gene reference (EnsemblGenomes) |
| Rtg1 | PpRtg1 | 72 | 48 | C4QWX5 | PAS_chr1-1_0371 |
| Rtg2 | PpRtg2 | 99 | 52 | C4R4L3 | PAS_chr3_0452 |
| Rtg3 | PpRtg3? | 26 | 44 | AOA70166.1 (GenBank) | PAS_chr2-1_0723 |
| Msn2 | PpMsn2/4 | 17 | 49 | C4R1J8 | PAS_chr2-1_0723 |
| Msn4 | 15 | 51 | |||
| Tor1 | PpTor
| 97 | 55 | C4R117 | PAS_chr2-1_0557 |
| Tor2 | 96 | 57 |