Primer name

Sequence (5'-3')

Length

Usage

Oligo dT

CTGTGAATGCTGCGACTACGATTTTTTTTTTTTTTTTTTT

40 mer

cDNA synthesis

HjChi-a

TGYTAYTTYACNAAYTGG

18 mer

Conserved region PCR

HjChi-b

GAYATHGAYTGGGARTAYCC

20 mer

HjChi-c

TTCCARTARTTCATNGCRTARTC

23 mer

DkChi-a

GYNGGNGGNTGGAAYTTYGGNAC

23 mer

DkChi-b

GAYTGGGARTAYCCNGG

17 mer

DkChi-c

AYTTCATNGCRAARTCNAC

19 mer

DkChi-d

TARTANGCNARRAANCCNGC

20 mer

3'RACE

CTGTGAATGCTGCGACTACGAT

22 mer

3' RACE PCR

HjChi-1

CTGCGTCGTTATGGATTTGATGGT

24 mer

DkChi-1

GACAAGCATCTCTACACTG

19 mer

DkChi-2

TTCCTCAGCTCGGCAAGGTAGTT

23 mer

HjChi-2

AGMSSMRASATGGCAAAGCTT

21 mer

5' RACE PCR

HjChi-3

AGTCCAGGATTTGTCCAAGCTG

22 mer

AAP

GGCCACGCGTCGACTAGTACGGGIIGGGIIGGGIIG

36 mer

AUAP

GGCCACGCGTCGACTAGTACC

21 mer

DkChi-3

TTGCTCATCCCACCAGCAAC

20 mer

DkChi-4

ATCAGCTCCTGAGCCAG

17 mer

DkChi-5

CGAGATCCAGGATATTCCC

19 mer

DkChi-6

AAAGCCGTACCCTCTCAGG

19 mer

DkChi-7

AACTACCTTGCCGAGCTGAGG

21 mer

HjChi-4

AGAGGCGAGATGGCAAAGCTTCT

23 mer

Full length amplification

DkChi-8

CTCCTGCCCAGAACAGTAAC

20 mer

DkChi-9

CCCAAGACTGTGGTCAAC

18 mer

β-actin-a

GAAAGACAGTTACGTTGGTG

20 mer

Organ expression

β-actin-b

AGAATCTAGCACAATGCCAG

20 mer

HjChi-5

TCCCAAATTCCCAAGACACT

20 mer

HjChi-6

TCCAACCCATTCATTTCCAC

20 mer

DkChi-10

CTGCCTAATGACAAGGATTAC

21 mer

DkChi-11

GCCGACCCATATTCCATTCT

20 mer