Primer name | Sequence (5'-3') | Length | Usage |
Oligo dT | CTGTGAATGCTGCGACTACGATTTTTTTTTTTTTTTTTTT | 40 mer | cDNA synthesis |
HjChi-a | TGYTAYTTYACNAAYTGG | 18 mer | Conserved region PCR |
HjChi-b | GAYATHGAYTGGGARTAYCC | 20 mer | |
HjChi-c | TTCCARTARTTCATNGCRTARTC | 23 mer | |
DkChi-a | GYNGGNGGNTGGAAYTTYGGNAC | 23 mer | |
DkChi-b | GAYTGGGARTAYCCNGG | 17 mer | |
DkChi-c | AYTTCATNGCRAARTCNAC | 19 mer | |
DkChi-d | TARTANGCNARRAANCCNGC | 20 mer | |
3'RACE | CTGTGAATGCTGCGACTACGAT | 22 mer | 3' RACE PCR |
HjChi-1 | CTGCGTCGTTATGGATTTGATGGT | 24 mer | |
DkChi-1 | GACAAGCATCTCTACACTG | 19 mer | |
DkChi-2 | TTCCTCAGCTCGGCAAGGTAGTT | 23 mer | |
HjChi-2 | AGMSSMRASATGGCAAAGCTT | 21 mer | 5' RACE PCR |
HjChi-3 | AGTCCAGGATTTGTCCAAGCTG | 22 mer | |
AAP | GGCCACGCGTCGACTAGTACGGGIIGGGIIGGGIIG | 36 mer | |
AUAP | GGCCACGCGTCGACTAGTACC | 21 mer | |
DkChi-3 | TTGCTCATCCCACCAGCAAC | 20 mer | |
DkChi-4 | ATCAGCTCCTGAGCCAG | 17 mer | |
DkChi-5 | CGAGATCCAGGATATTCCC | 19 mer | |
DkChi-6 | AAAGCCGTACCCTCTCAGG | 19 mer | |
DkChi-7 | AACTACCTTGCCGAGCTGAGG | 21 mer | |
HjChi-4 | AGAGGCGAGATGGCAAAGCTTCT | 23 mer | Full length amplification |
DkChi-8 | CTCCTGCCCAGAACAGTAAC | 20 mer | |
DkChi-9 | CCCAAGACTGTGGTCAAC | 18 mer | |
β-actin-a | GAAAGACAGTTACGTTGGTG | 20 mer | Organ expression |
β-actin-b | AGAATCTAGCACAATGCCAG | 20 mer | |
HjChi-5 | TCCCAAATTCCCAAGACACT | 20 mer | |
HjChi-6 | TCCAACCCATTCATTTCCAC | 20 mer | |
DkChi-10 | CTGCCTAATGACAAGGATTAC | 21 mer | |
DkChi-11 | GCCGACCCATATTCCATTCT | 20 mer |