Gene set name | Description | Genes in Overlap (k) | p-value | FDR q-value |
NIKOLSKY_BREAST_CANCER_ 8Q23_Q24_AMPLICON | Genes within amplicon 8q23-q24 identified in a copy number alterations study of 191 breast tumor samples. | 6 | <0.01 | <0.01 |
LIAO_METASTASIS | Genes up-regulated in the samples with intrahepatic metastatic hepatocellular carcinoma (HCC) vs primary HCC. | 7 | <0.01 | <0.01 |
SHEDDEN_LUNG_CANCER_ POOR_SURVIVAL_A6 | Cluster 6 of method A: up-regulation of these genes in patients with non-small cell lung cancer (NSCLC) predicts poor survival outcome. | 6 | <0.01 | <0.01 |
OXFORD_RALA_OR_RALB_ TARGETS_UP | Genes up-regulated after knockdown of RALA or RALB [GeneiD = 5898; 5899], which were also differentially expressed in bladder cancer compared to normal bladder urothelium tissue. | 3 | <0.01 | 0.01 |
PUJANA_BRCA2_PCC_ NETWORK | Genes constituting the BRCA2-PCC network of transcripts whose expression positively correlated (Pearson correlation coefficient, PCC > = 0.4) with that of BRCA2 [GeneID = 675] across a compendium of normal tissues. | 5 | <0.01 | 0.03 |
KONG_E2F3_TARGETS | Genes up-regulated in MEF cells (embryonic fibroblasts) at 16 hr after serum stimulation and knockdown of E2F3 [GeneID = 1871] by RNAi. | 3 | <0.01 | 0.04 |