Location/type

H. debilis

Common sites in H. debilis

Unique site in H. debilis

H. niveus

Common sites in

H. niveus

Unique site in

H. niveus

H. praecox

Common sites in

H. praecox

Unique sites in H. praecox

C

I

C

I

C

I

C

I

C

I

C

I

Protein coding transcripts

175

175

173

2

2

173

174

160

13

14

170

179

167

3

12

First codon position

54

54

54

0

0

56

55

52

4

3

55

56

55

0

1

Second codon position

102

100

100

2

0

99

93

90

9

3

98

99

96

2

3

Third codon position

19

21

19

0

2

18

26

18

0

8

17

24

16

1

8

Creation of start codon

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Substitution of start codon

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Creation of stop codon

1

1

1

0

0

2

2

2

0

0

1

1

1

0

0

Substitution of a stop codon

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Non-synonymous substitutions

156

154

154

2

0

154

147

141

13

6

152

153

150

2

3

Synonymous substitutions

19

21

19

0

2

19

27

19

0

8

18

26

17

1

9

Non-protein coding transcripts

195

202

185

10

17

262

262

203

59

59

201

202

169

32

33

tRNA

3

3

3

0

0

3

3

2

1

1

3

3

3

0

0

rRNA

1

0

0

0

0

3

13

3

0

10

3

3

2

1

1

Long noncoding RNA

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Intergenic region

191

199

182

9

17

256

246

198

58

48

195

196

164

31

32

Total no of sites

370

377

358

12

19

435

436

363

72

73

371

381

336

35

45