Group | Viruses | GenBank\Accession No. | Forward Primers/Tm value | Reverse Primers/Tm value | Probes/Tm value | Ampliconsize (bp) |
A | EEEV | NC_003899.1 | CTGTGTGTTCGTACGCTGCG/60.1 | GCTGCTTATTTTGCTGTGGGC/60/7 | CGCCCAAGGCGCCGCAGACAA/74.7 | 75 |
WEEV | NC_003908.1 | GATCGGGCCGTCCATGAG/61 | GCTTCTATTTCCTTCAGAGGCG/58.3 | TACGCCCCGCGCCTCGATC/69.3 | 105 | |
B | VEEV | NC_001449.1 | CCCCGTTCAATGTGTCTGTCAC/61.2 | CAGGCTATGCTGCTACGATGC/59.6 | TTGCAGCACAAGAATCCCTCGCG/69.1 | 69 |
CHIKV | NC_004162.2 | TGGCTTTTTTAGCCGTAATGAGC/60.5 | CGGTACTCCCACCGTGTTCG/62.2 | TCGGTGCCCACACTGTGAGCGC/71.5 | 88 | |
C | MVEV | NC_000943.1 | GCCATGATGGTGATGCAACT/58 | CTGTCTGGGAATGAGCAGCC/59.4 | TCGCCCTCCAGCACCAAATCGA/69.6 | 99 |
SLEV | NC_007580.2 | CTTGTGCGTCCTCTCCAGCC/61.8 | CTGGGTGCAAAGCCCCTC/60.2 | CGTGCCAGGGACCCTCCCGAGTC/72.4 | 68 | |
D | WNV | NC_001563.2 | CAGCGATCTCTCCACCAAAGC/60.8 | GGGTCAGCACGTTTGTCATTG/60 | TGCCCGACCATGGGAGAAGCTCA/70.6 | 69 |
JEV | NC_001437.1 | ACTGGGTTACCAAAGCCGTTG/59.9 | AGTCCTTCCACCTCCTCTACAGC/58.9 | CCCCCACGGCCCAAGCCTCGT/73.5 | 152 | |
E | CEV | U12800.1 | AGCAGGATATAGGTCATTTCTGCC/58.7 | GCCAATCGCAGTTGCTTATATG/58.4 | CCCCAGGTGTGCCACTGTTAGATTCC/68.1 | 90 |
LCV | NC_004109.1 | ATACACACCCATCACTTACAGCC/56.7 | CATTTGCAAGAGAGAGGACAAGC/ CATTTGCAAGAGAGAGGACAAGT/59.1 | AGGCAACCAAACTCTTCGCATCCCC/69.5 | 75 | |
F | POWV | NC_003687.1 | GGCACTCCCCAACTCCG/ GGCACTCCCCAGCTCCA/59.3 | GCTGGGGCAAGTCAATCTTG/59.4 | TCAACCCCCATCATCATGCGCCT/70.1 | 81 |
TBEV | NC_001672.1 | GGGGGGCGGTTCTTGTT/59.3 | CACACATCACCTCCTTGTCAGAC/58.2 | CTCCCTGAGCCACCATCACCCAGAC/69.6 | 72 | |
G | TOSV | NC_006320.1 | CTAACTGGGCCACACACATGC/60 | TCACCATTGCTCGCACTGG/60.4 | CTGCCTATTCCCCCCCTAACCCC/67 | 135 |
| RVFV | NC_014396.1 | CTTGACCCCCTTCAACATCAAA/59.8 | CTCCAGAATCACCACTTGCTCTAC/58.1 | AAGCCTCTGCCCCAACTGACCCTGC/71.6 | 121 |
H | DENV | NC_001474.1 | CAAAAGGAAGTCGYGCAATA/53.8 | CTGAGTGAATTCTCTCTGCTRAAC/56.5 | CATGTGGYTGGGAGCRCGC/65.5 | 112 |
| IC | HM745932 | GTCAAGATCCTCAAAGATACAGCT/54.8 | ACTCTTGGCCGTTGGTTTG/57.3 | AGTTTGGAGTCTTGGATGTCGCAT/62 | 113 |