Primer

Oligonucleotide sequence (5'-3')

Conc (µM)

Amplicon size (bp)

Specificity

Type I-F

GCTTTAAAGAGTGTCGTTACAGG

0.048

613

SCCmec I

Type I-R

GTTCTCTCATAGTATGACGTCC

Type II-F

CGTTGAAGATGATGAAGCG

0.032

389

SCCmec II

Type II-R

CGAAATCAATGGTTAATGGACC

Type III-F

CCATATTGTGTACGATGCG

0.04

280

SCCmec III

Type III-R

CCTTAGTTGTCGTAACAGATCG

Type IVa-F

GCCTTATTCGAAGAAACCG

0.104

776

SCCmec IVa

Type IVa-R

CTACTCTTCTGAAAAGCGTCG

Type IVb-F

TCTGGAATTACTTCAGCTGC

0.092

493

SCCmec IVb

Type IVb-R

AAACAATATTGCTCTCCCTC

Type IVc-F

ACAATATTTGTATTATCGGAGAGC

0.078

200

SCCmec IVc

Type IVc-R

TTGGTATGAGGTATTGCTGG

Type IVd-F

CTCAAAATACGGACCCCAATACA

0.28

881

SCCmec IVd

Type IVd-R

TGCTCCAGTAATTGCTAAAG

Type V-F

GAACATTGTTACTTAAATGAGCG

0.6

325

SCCmec V

Type V-R

TGAAAGTTGTACCCTTGACACC

MecA147-F

GTG AAG ATA TAC CAA GTG ATT

0.046

147

mecA

MecA147-R

ATG CGC TAT AGA TTG AAA GGA T