Primer | Oligonucleotide sequence (5'-3') | Conc (µM) | Amplicon size (bp) | Specificity |
Type I-F | GCTTTAAAGAGTGTCGTTACAGG | 0.048 | 613 | SCCmec I |
Type I-R | GTTCTCTCATAGTATGACGTCC |
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Type II-F | CGTTGAAGATGATGAAGCG | 0.032 | 389 | SCCmec II |
Type II-R | CGAAATCAATGGTTAATGGACC |
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Type III-F | CCATATTGTGTACGATGCG | 0.04 | 280 | SCCmec III |
Type III-R | CCTTAGTTGTCGTAACAGATCG |
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Type IVa-F | GCCTTATTCGAAGAAACCG | 0.104 | 776 | SCCmec IVa |
Type IVa-R | CTACTCTTCTGAAAAGCGTCG |
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Type IVb-F | TCTGGAATTACTTCAGCTGC | 0.092 | 493 | SCCmec IVb |
Type IVb-R | AAACAATATTGCTCTCCCTC |
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Type IVc-F | ACAATATTTGTATTATCGGAGAGC | 0.078 | 200 | SCCmec IVc |
Type IVc-R | TTGGTATGAGGTATTGCTGG |
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Type IVd-F | CTCAAAATACGGACCCCAATACA | 0.28 | 881 | SCCmec IVd |
Type IVd-R | TGCTCCAGTAATTGCTAAAG |
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Type V-F | GAACATTGTTACTTAAATGAGCG | 0.6 | 325 | SCCmec V |
Type V-R | TGAAAGTTGTACCCTTGACACC |
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MecA147-F | GTG AAG ATA TAC CAA GTG ATT | 0.046 | 147 | mecA |
MecA147-R | ATG CGC TAT AGA TTG AAA GGA T |
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