Primer name | Sequence | Number of bases (bp) | Annealing temperatures (˚C) | Uses |
CDA F-1 | TGYMGNGAYGTNATHCARTGYAC | 23 | 58.4 | Primary PCR |
CDA F-2 | GGNYTNCARGCNHTNMGNTGYCC | 23 | 63.7 | Primary PCR |
CDA F-3 | GAYTGYWSNGAYGGNWSNGAYGA | 23 | 61.3 | Primary PCR |
CDA F-4 | ACNTTYGAYGAYGCNATHAA | 20 | 51.3 | Primary PCR |
CDA R-1 | CCAYTGDATNACYTGNGTCATNGT | 24 | 58.5 | Primary PCR |
CDA R-2 | GCNGTDATNGTNSWRTCRTANAARAA | 26 | 57.1 | Primary PCR |
CDA R-3 | AAYTGNBWRTTNCCNCCNACNCKNA | 25 | 60.8 | Primary PCR |
CDA R-4 | TAYTTRTGNSWNACRAARAANGT | 23 | 52.4 | Primary PCR |
CjCDA 5'-1 | GCAGCGGCTTTACTTTCTTTCG | 22 | 58.6 | 5' RACE |
CjCDA 5'-2 | TCTGCAGCTCCAGGTCAAAG | 20 | 58.4 | 5' RACE |
AAP | GGCCACGCGTCGACTAGTACGGGIIGGGIIGGGIIG | 36 | 76.5 | 5' RACE |
AUAP | GGCCACGCGTCGACTAGTAC | 20 | 62.5 | 5' RACE |
CjCDA 3'-1 | ACAACCCCAACGGCTGCTC | 19 | 60.4 | 3' RACE |
CjCDA 3'-2 | GGCTGCTCCATCAAGTCCAC | 20 | 60.4 | 3' RACE |
3' RACE | CTGTGAATGCTGCGACTACGAT | 22 | 58.6 | 3' RACE |
CjCDA Full F | CGATCAGACCGGGAAACAAC | 20 | 58.4 | Full length PCR |
CjCDA Full R | CTGGACACAATCATGTATAC | 20 | 52.2 | Full length PCR |
β-actin F | ATGTACGTGGCCATCCAGG | 19 | 58.2 | Tissue expression |
β-actin R | CTCGTTGCCGATGGTGATG | 19 | 58.2 | Tissue expression |
CjCDA F | GCCCAACATTACCGACTCTTCG | 22 | 60.4 | Tissue expression |
CjCDA R | ATCACCTGCGTCATGGTCACG | 21 | 60.4 | Tissue expression |