| Taxonomic Unit | Microorganism Name | Enzyme | Substrate | Product |
| Nitrifying Bacteria | Nitrifs 1 | Ammonia monooxygenase | Ammonia NH3 | Hydroxylamine NH2OH |
| Nitrifying Bacteria | Nitrifs 2 | Hydroxylamine oxidoreductase | Hydroxylamine | Nitrite NO2 |
| Nitrifying Bacteria | Nitrifs 3 | Nitrite oxidoreductase | Nitrite | Nitrate NO3 |