| SPOLDB4 Lineage | Strains (n) | % |
| CAS 1_KILI | 33 | 16.1 |
| BEIJING/W | 28 | 13.7 |
| Bovis 1_BCG | 1 | 0.5 |
| U | 7 | 3.4 |
| S | 10 | 4.9 |
| EAI 5 and EAI 3 | 8 | 3.9 |
| LAM 9 | 14 | 6.8 |
| LAM 11 ZWE | 9 | 4.4 |
| T1 | 9 | 4.4 |
| LAM 3and s/convergent | 15 | 7.3 |
| CAS | 4 | 1.9 |
| CAS 1 DELHI | 11 | 5.3 |
| CAS 2 | 2 | 0.9 |
| LAM 4 | 1 | 0.5 |
| T3 ETH | 3 | 1.4 |
| T3 | 4 | 1.9 |
| MANU | 1 | 0.5 |
| T2 | 3 | 1.4 |
| EA11 SOM | 1 | 0.5 |
| EA3 IND | 1 | 0.5 |
| H1 | 1 | 0.5 |
| H3 | 2 | 0.9 |
| UNDETERMINED | 36 | 17.6 |
| TOTAL | 204 | 100 |