No. | Descriptor | Group | # Features |
1 | Amino acid composition | Amino acid composition | 20 |
2 | Dipeptide composition | 400 | |
3 | Tripeptide composition | 8000 | |
4 | Normalized Moreau-Broto | Autocorrelation | 240a |
5 | Moran | 240a | |
6 | Geary | 240a | |
7 | Composition | CTD | 21 |
8 | Transition | 21 | |
9 | Distribution | 105 | |
10 | Conjoint Triad | Conjoint Triad | 343 |
11 | Sequence-order-coupling number | Quasi-sequence-order | 60a |
12 | Quasi-sequence-order descriptors | 100a | |
13 | Type I | Pseudo-amino acid composition | 50 |
14 | Type II | 80 | |
15 | Principal components analysis (amino acid properties based) | Proteochemometric descriptors | 175b |
16 | Principal components analysis (2D and 3D molecular descriptors based) | 4025b | |
17 | Factor analysis (amino acid properties based) | 175b | |
18 | Factor analysis (2D and 3D molecular descriptors based) | 4025b | |
19 | Multidimensional scaling (amino acid properties based) | 175b | |
20 | Multidimensional scaling (2D and 3D molecular descriptors based) | 4025b | |
21 | BLOSUM and PAM matrix-derived descriptors | 175b | |
22 | PSSM profile | PSSM | - |