| Multiplex groups | Targeted genes | Size (pb) | Targeted species | Isolates identified |
| Group 1 | curA-F | 180 | Lactobacillus curvatus | NI |
| curA-R | ||||
| sakP-F | 200 | Lactobacillus sakei | NI | |
| sakP-R | ||||
| entB-F | 162 | Enterococcus faecium | NI | |
| entB-R | ||||
| entA-F | 126 | Enterococcus faecium | NI | |
| entA-R | ||||
| plnEF-F | 428 | Lactobacillus plantarum | Is2, Is9, Is12 and Is13 | |
| plnEF-R | ||||
| Group 2 | entA-F | 126 | Enterococcus faecium | NI |
| entA-R | ||||
| entP-F | 112 | Enterococcus Faecium | NI | |
| entP-R | ||||
| pedA-F | 600 | Pediococcus acidilactici | NI | |
| pedA-R | ||||
| sakQ-F | 200 | Lactobacillus sakei | NI | |
| sakQ-R | ||||
| plnA-F | 450 | Lactobacillus plantarum | Is2, Is9, Is12 and Is13 | |
| plnA-R |