Type of DEC | Genes | Primer | Primer sequence (5’ - 3’) | Size (bp) | References |
ETEC | eltB | LT-F | TCTCTATGTGCATACGGAGC | 322 | [20] |
| LT-R | CCATACTGATTGCCGCAAT | |||
| estA | ST-F | GTCAAACCAGTA(G/A)GGTCTTCAAAA | 147 | [20] |
| ST-R | CCCGGTACA(G/A)GGAGGATTACAACA | |||
EHEC | vit1 | VT1-F | GAAGAGTCCGTGGGATTAC | 130 | [20] |
| VT1-R | AGCGATGCAGCTATTAATAA | |||
| vit2 | VT2-F | ACCGTTTTTCAGATTTT(G/A)CACATA | 298 | [20] |
| VT2-R | TACACAGGAGCAGTTTCAGACAGT | |||
EPEC | eaeA | eae-F | CACACGAATAAACTGACTAAAATG | 376 | [20] |
| eae-R | AAAAACGCTGACCCGCACCTAAAT | |||
| bfpA | bfpA-F | TTCTTGGTGCTTGCGTGTCTTTT | 367 | [20] |
| bfpA-R | TTTTGTTTGTTGTATCTTTGTAA | |||
EAEC | pCVD432 | EA-F | CTGGCGAAAGACTGTATCAT | 630 | [20] |
| EA-R | AAATGTATAGAAATCCGCTGTT | |||
EIEC | ial | SHIG-F | CTGGTAGGTATGGTGAGG | 320 | [20] |
| SHIG-R | CCAGGCCAACAATTATTTCC | |||
Shigella ipaH | ipaH | ipaH-F | GTTCCTTGACCGCCTTTCCGATACCGTC | 619 | [21] |
| ipaH-R | GCCGGTCAGCCACCCTCTGAGAGTAC | |||
STEC O157 | eaeA | eae-F | CACACGAATAAACTGACTAAAATG | 376 | |
eae-R | AAAAACGCTGACCCGCACCTAAAT | ||||
stx1 | X1-F | CAGTTAATGTGGTGGCGAAG | 894 | [22] | |
X1-R | CTGCTAATAGTTCTGCGCATC | ||||
stx2 | X2-F | CTTCGGTATCCTATTCCCGG | 478 | ||
X2-R | GGATGCATCTCTGGTCATTG |