S/N

SSR LOCI

LINKAGE GROUP

TA (˚C)

PRIMER SEQUENCE

SSR REPEAT MOTIF

EXPECTED FRAGMENT SIZE (bp)

FLUORESCENT LABEL

ACCESSION NUMBER

1

mEg CIR3813

1

52

F-CATACCCTGCTTATCTTTC

R-GTAGATACCCGTTAGTTGAC

(GA)19

167

FAM

AJ578734

2

mEg CIR0793

2

56

F-GTACTTCGCAACTATTCCTTTTCTT

R-AGTTGATCGTGGTGCCTGAC

(GA)15

149

FAM

AJ578545

3

mEg CIR0425

3

58

F-AGCAAGAGCAAGAGCAGAACT

R-CTTGGGGGCTTCGCTATC

(CCG)9

232

NED

AJ578521

4

sMg 00156

4

50

F-GGTGTCATAACTTCGTTGTTGCT

R-ATGCTCAAAAGTGGGTTTCTCTC

(CT)15

237

NED

Pr010615888^*

5

mEg CIR3828

5

50

F-AGCCAGATGGAAATACAC

R-GTGCGATAAAGAGGAGAGT

(GA)23

282

VIC

AJ578738

6

sEg 00154

6

57

F-TCCCCCAATACTCATCATGC

R-TGATCGACGGTTGTCACATT

(CAG)5

238

FAM

EY410356^**

7

sMo 00102

7

53

F-ATGAGATGGGACAAATCAAAC

R-ACCATACCAACTAGAGAACTAAACA

(AG)11

235

FAM

Pr010615939^*

8

sMg 00228

8

54

F-CACGTATATGAGCAGGATTTGA

R-CTCCAAACCAACTAGAGCTGA

(AT)25

205

PET

Pr010615913^*

9

sMg 00016

9

52

F-GCGATTCCGGTTATCTTTAG

R-GAGTTTTTGCTGTGATGATTAG

(GA)13

274

VIC

Pr010615861^*

10

mEg CIR3519

10

52

F-CCACTGCTTCAAATTTACTAG

R-GCGTCCAAAACATAAATCAC

(GA)15(GT)8

236

NED

AJ578672

11

sMg 00120

11

54

F-GATCAATGCGAGAAATCAGG

R-GATCATGCTTATCCTTTCCAAGT

(AT)11

152

NED

Pr010615881^*

12

mEg

CIR0790

12

52

F-TTGGTGGTCCTTTTGAATATC

R-ACAAACCCAGCACTTAAAATAAC

(GA)19

215

VIC

AJ578544

13

sEg 00151

13

57

F-ATCACAACAGCAGCAGCATC

R-CGCATCAAGAAACATGGAGA

(CAG)8

219

PET

EY411661^**

14

sMg 00179

14

54

F-AACCCCTTTTTCATGCTCTAA

R-CTGATTTTGGAATCAGAGGTG

(AAAAG)6

214

VIC

Pr010615893^*

15

sMg 00087

15

58

F-CACCTAAAAACGGCAAGGAAC

R-GGAGGAGAGAAATGGAAGACG

(AG)19AA(AG)

212

PET

Pr010615880^*

16

mEg CIR3745

16

52

F-GGAAGTCTTGATGTTGAAAG

R-ATCAAGCAGTCGCATAATAC

(GA)18

PET

AJ578718