Predicted miRNA | Target gene transcript | Accession number | Hybridization | MFEa (kcal/mol) | Pairing pattern |
HCV-miRMD39-3p | XIAP | U45880 | target 5' U G GGG G 3' CGG GAG GGGAUUG GCC CUC CCUUAAC miRNA 3' A AUGUGG 5' | −19.2 | 5’canonical |
GNAI3 | M27543 | target 5' A AAGA CA U C 3' UGGUGAGUA GCC GG UUG GCCACUCAU UGG CC AAC miRNA 3' G UU 5' | −23.1 | 3’compensatory | |
ITK | D13720 | target 5' A AA A 3' GA ACAUUGGAAUUG CU UGUGGCCUUAAC miRNA 3' GCCA CA 5' | −21.2 | 5’canonical | |
LIFR | X61615 | target 5' U A UG UA GG A 3' GUGA GUAU U GGA UG CACU CAUG G CCU AC miRNA 3' GC UG UA 5' | −19.2 | 3’compensatory | |
OSM | AF129855 | target 5' U G G A 3' GUGA GUG GCUGGGA CACU CAU UGGCCUU miRNA 3' GC G AAC 5' | −22.6 | 5’canonical | |
IL21R | AF254667 | target 5' G A A 3' GGUGAG ACAUC CCACUC UGUGG miRNA 3' G A CCUUAAC 5' | −21.9 | 3’compensatory | |
CREBBP | NM_004380 | target 5' G A GCUGGG UG UUG G 3' CGG GAG GC CGG UG GCC CUC UG GCC AC miRNA 3' A A UG UUA 5' | −22.3 | 3’compensatory | |
PIAS3 | AB021868 | target 5' U CAG CCU C 3' GG GAGU GC CCGG AUUG CC CUCA UG GGCC UAAC miRNA 3' G A U U 5' | −21.2 | 3’compensatory | |
PRKAA2 | BC069823 | target 5' G UUGGCA U 3' GGUG GU ACACC CCAC CA UGUGG miRNA 3' G U CCUUAAC 5' | −17.9 | 3’compensatory | |
KIAA1303 | NM_020639 | target 5' U A 3' GG GGG ACACUGGAA CC CUC UGUGGCCUU miRNA 3' G A A AAC 5' | −24.4 | 5’canonical | |
CAB39L | AK022639 | target 5' G A C 3' GGUGAGUG GGGA CCACUCAU CCUU miRNA 3' G GUGG AAC 5' | −22.7 | 3’compensatory | |
CD8A | NM_001768 | target 5' U CUUA C A 3' GGUGAG AC CUGGAA CCACUC UG GGCCUU miRNA 3' G A U AAC 5' | −23.4 | 3’compensatory | |
ICOS | AB023135 | target 5' U A AAACAU A 3' GGU GG UGC CCGGAAUUG CCA UC AUG GGCCUUAAC miRNA 3' G C U 5' | −23.7 | 5’canonical |