PCR | Gene | Primer | Nucleotide sequence(5’ → 3’) | Product size (bp) |
Multiplex I | Class A β-lactamase | |||
blaCTX-M-3 | F | AATCACTGCGCCAGTTCACGCT | 479 | |
R | GAACGTTTCGTCTCCCAGCTGT | |||
blaCTX-M-14 | F | TACCGCAGATAATACGCAGGTG | 355 | |
R | CAGCGTAGGTTCAGTGCGATCC | |||
blaSHV | F | AACGGAACTGAATGAGGCGCT | 141 | |
R | TCCACCATCCACTGCAGCAGCT | |||
blaTEM | F | GAAGATCAGTTGGGTGCACGAGT | 520 | |
R | CAACTTTATCCGCCTCCATCCAGT | |||
Class C β-lactamase | ||||
blaDHA | F | AACTTTCACAGGTGTGCTGGGT | 405 | |
R | CCGTACGCATACTGGCTTTGC | |||
Simplex | blaCMY-2 | F | CTGACAGCCTCTTTCTCCACA | 1100 |
R | CTACGTAGCTGCCAAATCCAC | |||
Multiplex II | hlyA | F | AACAACGATAAGCACTGTTCTGG | 1177 |
R | CCATATAAGCGGTCATTCCCG | |||
usp | F | GGAAAATGGTCGCTCAGTGG | 992 | |
R | CTGTAGTGAATCTCATCGTGTAGTC | |||
sat | F | TCAGAAGCTCAGCGAATCATTG | 931 | |
R | CATTATCACCAGTAAAACGCACC | |||
fyuA | F | GGCTTTATCCTCTGGCCTT | 878 | |
R | GAAAACCCAGTCATCGGTGG | |||
iron | F | CTCTGGTGGTGGAAGCC | 815 | |
R | TGTCGGTACAGGCGGTTC | |||
iutA | F | CACTCCGGTACTCCAGTCA | 688 | |
R | CCTCCAACCAGATGTTCTTCG | |||
iucD | F | CCGGAGAAGCCTGAAATATATTCA | 584 | |
R | CCGGATTGTCATATGCAGACC | |||
Multiplex III | fimH | F | GTTTATAATTCGAGAACGGATAAGCC | 491 |
R | GTGCATAATTTGCCGTTAATCCC | |||
cnf1 | F | TTCTTCTGTACTTCCCCCAG | 408 | |
R | TGAGCGGCATCTACTATGAAGT | |||
traT | F | CATAACCACGGTTCAGCCATC | 328 | |
R | TTGCACTGGTCAGTTCCAC | |||
kpsMTII | F | CATCAGACGATAAGCATGAGCA | 269 | |
R | TGCGCATTTGCTGATACTGT | |||
papG II | F | GGGCCCCCAAGTAACTC | 189 | |
R | GGATGAGCGGGCCTTTG |