| Organisms’ species by standard culture | IBS-D (n =20) | IBS-C (n = 20) | Controls (n = 20) | P value (Overall) | ||||||||||
| Prevalence (%) | Degree | Prevalence (%) | Degree | Prevalence (%) | Degree | |||||||||
| Mild | Moderate | Marked | Mild | Moderate | Marked | Mild | Moderate | Marked | ||||||
| Coliform (enterobacterica) | 95 | 15.8 | 42.1 | 42.1 | 95 | 15.8 | 68.4 | 15.8 | 95 | 26.3 | 36.8 | 36.8 | 1.000 | |
| E. col | 90 | 16.7 | 38.9 | 44.4 | 95 | 26.3 | 63.2 | 10.5 | 90 | 22.2 | 44.4 | 33.3 | 0.804 | |
| Klebsiella | 25 | 40 | 20 | 40 | 25 | 80 | 20 |
| 60 | 25 | 41.7 | 33.3 | 0.030 | |
| Other (non fermenters) | 10 |
| 50 | 50 | 30 | 66.7 | 33.3 |
| 10 | 50 | 50 | 0.235 | ||
| Aerobic gram positive | 80 | 25 | 56.3 | 18.8 | 95 | 31.6 | 63.2 | 5.3 | 85 | 52.9 | 35.3 | 11.8 | 0.364 | |
| Staphylococci | 55 | 27.3 | 72.7 |
| 50 | 70 | 30 |
| 55 | 54.5 | 36.4 | 9.1 | 0.176 | |
| Enterococci | 65 | 30.8 | 61.5 | 7.7 | 70 | 28.6 | 64.3 | 7.1 | 85 | 64.7 | 35.3 | 0.216 | ||
| Diphtheroid | 35 | 57.1 | 42.9 |
| 30 | 83.3 | 16.7 |
| 10 | 50 | 50 | 0.155 | ||
| Bifidobacterium | 5 |
| 100 |
| 20 |
| 100 |
| 5 |
|
| 100 | 0.180 | |
| Eubacterium | 60 | 25 | 41.7 | 33.3 | 80 | 18.8 | 50 | 31.3 | 80 | 6.3 | 43.8 | 50 | 0.256 | |
| Veillonella | 40 | 37.5 | 62.5 |
| 50 | 20 | 70 | 10 | 65 | 61.5 | 38.5 | 0.281 | ||
| Peptostreptococci/Ruminococcus | 60 | 16.7 | 66.7 | 16.7 | 75 | 6.7 | 73.3 | 20 | 65 | 7.7 | 76.9 | 15.4 | 0.592 | |
| Fusobacterium | 35 | 28.6 | 57.1 | 14.3 | 40 | 50 | 37.5 | 12.5 | 65 | 7.7 | 76.9 | 12.5 | 0.125 | |
| Bacterotides | 85 | 17.6 | 52.9 | 29.4 | 90 |
| 33.3 | 66.7 | 60 | 8.3 | 50 | 41.7 | 0.048 | |
| Prevotella | 50 | 20 | 50 | 30 | 40 |
| 75 | 25 | 55 | 9.1 | 45.5 | 45.5 | 0.627 | |
| Clostridium | 50 | 30 | 40 | 30 | 70 | 7.1 | 57.1 | 35.7 | 65 |
| 53.8 | 46.2 | 0.400 | |
| Actinomyces | 20 | 75 | 25 |
| 5 |
| 100 |
| 15 | 100 |
| 0.364 | ||
| Fungus | 10 | 50 | 50 |
| 35 | 85.7 | 14.3 |
| 5 |
| 100 | 0.024 | ||
| Candida | 5 |
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| 5 |
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| Aspergillus | 5 |
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| 30 |
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| 0.007 | |
| Organisms’ species by VITIC culture |
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| Non fermenters | Serratia | 0 | 2 (10) | 0 | 0.126 | |||||||||
| Proteus | 1 (5) | 1 (5) | 1 (5) | 1.000 | ||||||||||
| Pseudomonas | 1 (5) | 3 (15) | 0 | 0.153 | ||||||||||