| Pathway | KOs | Pathway ID |
| Metabolic pathways | 113 | ko01100 |
| Biosynthesis of secondary metabolites | 71 | ko01110 |
| Biosynthesis of antibiotics | 27 | ko01130 |
| Microbial metabolism in diverse environments | 19 | ko01120 |
| Biosynthesis of amino acids | 17 | ko01230 |
| Ribosome | 15 | ko03010 |
| Starch and sucrose metabolism | 14 | ko00500 |
| Plant hormone signal transduction | 13 | ko04075 |
| Amino sugar and nucleotide sugar metabolism | 11 | ko00520 |
| Carbon metabolism | 11 | ko01200 |
| Plant-pathogen interaction | 10 | ko04626 |
| Photosynthesis | 10 | ko00195 |