Portugal

Cachena

Microsatelite

Heterozygosities

[163]

inbreeding coefficient (Fis)

Hardy weinberg equilibrum

Mean number of allele

Garvonesa

Microsatelite

Heterozygousity

[164]

Total Number of Allele

Mean number of allele

Hardy weinberg equilibrum

Italy

Maremmana

Single nucleotide Polymorphism

Heterozygousity

[19]

Runs of homozygousity

Linkage disequilibrium decay

Nucleotide diversity

Modicana

Single nucleotide Polymorphism

Wright Fixation Index

[165]

Runs of Homozygosity (ROH)

Heterozygousity

Scotland (UK)

Native Aberdeen Angus

Microsatellites

Expected/observed heterozygosity

[166]

Gene diversity

[167]

PIC

Allele frequencies

homozygosity

Nei’s genetic distance

Chillingham Wild Cattle

SNPs

Fraction of polymorphic loci

[168]

observed homozygosity

Inbreeding coefficient

linkage disequilibrium

ROHom and ROHet

heterozygosity

Ireland

Irish Moiled (Kerry)

SNPs

Effective population size

[169]

Runs of Homozygosity

Maximum Likelihood

Lincoln Red

Effective population size

[169]

Runs of Homozygosity

Maximum Likelihood

Nigeria

Muturu Cattle

SNPs

Nei’s genetic distance

[170]

Rsb Analysis

Homozygosity selection tests

Integrated haplotype score