| Gene | Forward primer (5’-3’) | Reverse primer (5’-3’) | Probe (5’-3’) |
| OsRAD6 | CGCACGACAACAACATCATG | TCCCACGGCGTGTCATC | TCTGGAACGCCGTCA TATTCGGACC |
| OsCDKB2 | GGAATCCCTCGAAAGTGTCTGA | TCGTACTGCAGCATTTTCTCAAG | TCCATGGTCTCGACGC TGATGCTC |
| OsRBCS2 | ATGCAGGTGTGGCCGATT | CAGGGCACCCACTTGGAA | CGAGACCCTCTCTT ACCTGCCACCG |
| OsTCP1 | GGAGGTAGCACAAGTGCACT | CCAATGACATGCGCAGCAGCAG | CGGTTGGTTGGTTGG TTGGTTTTCCATCG- |
| OsTCP12 | GAGCGCCAGCGACTCGTA | TTAAAGAAGAACAGATCAAAACCAGAGA | TCCGGTGTGTGCCCCGCATT |
| OsGRF10 | CCCATCTTCTTTCTTCATTCCTCTT | CTTCTCCTCATCCATTCTGACAACT | CCACCAAGAACCCC AAACCTTACCTCC |
| Pri-miR396c | GCTTGCAGCCATAAAGCTCTTC-3’ | TGCCATCTGCCTCTCTCTTGA | CCTCTCTCTTTCTA CGGCTGTGGAGCTGA |