No. | Primer name | EST/Contig ID | Repeat motif | Primer sequence (5'-3') | Ta (˚C) | Product size | No. of alleles | PIC | |
30 | KSL-1 | CLSS10849 | (CAA)10 | F: CACCACTCCATTTCATCCCA | R: GCTCATTCCCAAACCCAGAT | 55 | 162 - 171 | 3 | 0.197 |
31 | KSL-37 | CLSM1424 | (AGA)15 | F: TCTCTTGCTCCAATACCCGA | R: GTATCGGGCTCATGTCCCTT | 55 | 125 - 155 | 6 | 0.666 |
32 | KSL-51 | CLSZ1624 | (ATG)10 | F: CCCCTACCACCACCAAAGTC | R: TACCAAATGACATGCACCCC | 55 | 184 - 205 | 4 | 0.461 |
33 | KSL-271 | CLSS8197 | (ATG)12 | F: ACAAAGGCAAGATTGGGTCA | R: GCGGATATGCAGCCATAACA | 55 | 238 - 250 | 3 | 0.505 |
34 | KSL-316 | QGC8F02 | (AAT)11 | F: CGCAGCCTTCAAAACTACCA | R: AGCAACTGAAATCCAACCCC | 55 | 272 - 281 | 2 | 0.461 |
35 | KSL-317 | QGC8E09 | (ATG)11 | F: TGTGGATCTGAATGGGCATC | R: TGCAAGAATGTTGGCTTCCT | 55 | 248 - 251 | 2 | 0.496 |
36 | KSL-357 | CLSS10992 | (TGA)14 | F: GCAGCAACAAGAAACCCAAA | R: GCCCCAACATCATCATCATC | 55 | 255 - 283 | 2 | 0.356 |
37 | KSL-87 | CLSY5704 | (CT)17 | F: GCGGGATCGATACTTACCCT | R: ATCATCGACGGGCTTTTCTT | 55 | 256 - 272 | 7 | 0.614 |
38 | KSL-173 | CLSM444 | (CT)14 | F: ATAGTCACGACTCACGCCCA | R: CCATTTTCCTCTTTCTGCGA | 55 | 155 - 165 | 4 | 0.608 |
39 | KSL-245 | CLSM513 | (AG)16 | F: CTTCACCTCCGGAATCCTGT | R: GAGGCACGACTGCCATTTAG | 55 | 269 - 283 | 4 | 0.138 |
40 | KSLC-4 | A35 | (GGT)5 | F: TGGGGGAACATCACAAACAC | R: ACTTCCGACCACCAATAGGG | 55 | 196 - 199 | 2 | 0.328 |
41 | KSLC-30 | B14 | (CA)6 | F: GGGGCCTCTATCCACTCTCA | R: AAAGTCCAGCCATCTCTGCC | 55 | 162 - 164 | 2 | 0.437 |
42 | KSLC-322 | L146 | (TTATA)4 | F: CTCCTCCGGGAAACTATGGA | R: TCTCCAACACAACACCCACC | 55 | 290 - 300 | 3 | 0.349 |
43 | KSLC-443 | R439 | (GAAGAG)4 | F: GACGATGACGACGTGGAAAG | R: CCTCCAGCTGCAAACCAGTA | 55 | 262 - 271 | 2 | 0.063 |
44 | KSL-7 | CLSS10499 | (TCT)12 | F: TGCTCAATCTCGAGCTTATCCT | R: ATGTGCCCACAAGGAAGACA | 55 | 378 - 396 | 3 | 0.505 |
45 | KSL-26 | CLSM14994 | (TC)16 | F: GGGCTTTCTCTCCTTTCCTTT | R: AATTTGGATCCTGTCGAGGG | 55 | 300 - 319 | 8 | 0.743 |
46 | KSL-32 | CLSM14764 | (CT)14 | F: CGGGGAGCATTTAGTGTGTG | R: AATTTGGGGTCCGATTTGAG | 55 | 210 - 218 | 5 | 0.610 |
47 | KSL-43 | CLSM1373 | (ATC)9(TTC)8 | F: GACGCAAACCTTTACCAGCA | R: TCATTCCATTCCATTGGGTG | 55 | 269 - 281 | 3 | 0.501 |
48 | KSL-44 | CLSM13555 | (TCACCA)4tcat (CATCAC)5catcg (CCATCA)5 | F: CGATTCCTTCACCTCCACCT | R: CTGTCAATCGTGCCAGTTCC | 55 | 229 - 246 | 3 | 0.510 |
49 | KSL-75 | CLSY7906 | (TC)6tt(TC)6 | F: AGAGGCTTTCTACGCCAACC | R: TGAGGAGGGGGAAGTTCATC | 55 | 205 - 207 | 2 | 0.444 |
50 | KSL-83 | CLSY6646 | (AG)6tgtgt(GA) 7aa(GT)6 | F: GCGGAGCTTCTTTCTCACCT | R: GGAAAGAAAACGCATTTCGAG | 55 | 249 - 287 | 2 | 0.315 |
51 | KSL-92 | CLSY517 | (CT)20 | F: GGTCTCTTTCCTCTGCCCTG | R: TCGCGTTCTGAAGTAGCCAT | 55 | 188 - 196 | 5 | 0.735 |
52 | KSL-97 | CLSY4815 | (CT)11 | F: CGCAGAAAAGGGATCAGACA | R: TCAGAGACACTGCAAAAGGGA | 55 | 223 - 232 | 3 | 0.616 |
53 | KSL-102 | CLSY4549 | (TGA)5tgt(TGA)6 | F: AAGCCCCAATGACGAATCTC | R: TGTCAATAGCAATGGCGAAA | 55 | 313 - 320 | 3 | 0.121 |
54 | KSL-115 | CLSM11208 | (CT)11 | F: CATTGCACTCCGTCATCTCC | R: GGGTTGATTCCGAAAGTTCC | 55 | 210 - 212 | 2 | 0.477 |
55 | KSL-119 | CLSM10279 | (TC)16 | F: TTCGACTCGTCTTCGACGC | R: CGATGTCACACCACCCATCT | 55 | 271 - 279 | 4 | 0.642 |
56 | KSL-123 | CLSL2393 | (ATC)13 | F: ATTGTAACTTCTGCGGGCCT | R: GCCTCACATGTTCTTCCCCT | 55 | 336 - 360 | 4 | 0.511 |
57 | KSL-137 | CLSZ3622 | (TGA)9caatgatgaaaaagatgatgcagaggaggcagatgatgatgctggagatgaagatttctcaggagaagaagggggagag(GAT)6gaagaagaccctagtgaagatcctaaggcaaatggtaatcaagacgac(GAT)7gacgacgac(GAT)6 | F: TTCTCTGAGCTTCACAAGAGGG | R: TCATCACCATCATCATTTCCC | 55 | 281 - 298 | 4 | 0.666 |
58 | KSL-152 | CLSM12854 | (GAC)5gatgagc (AAG)8 | F: CGAGGTCGAAGAAGAGGAGG | R: TCCCATTAGGATCTCTGCCC | 55 | 268 - 284 | 2 | 0.063 |
Total | 176 | 24.63 | |||||||
Mean | 3.03 | 0.425+ |