No. | Primer name | EST/Contig ID | Repeat motif | Primer sequence (5'-3') | Ta (˚C) | Product sizes | No. of alleles | PIC | |
1 | SML-001 | QGC15N13 | (CATGAT)6 | F: CCATGGATCCTGTGTGAAGA | R: CACCATGTTCCACTTCCACTT | 55 | 176 - 198 | 4 | 0.581 |
2 | SML-002 | QGH4c05 | (TTC)17 | F: GTGATTGCATGCCAAATGAA | R: TTAGTAGCCCGCATGCTTTT | 55 | 204 - 225 | 4 | 0.310 |
3 | SML-003 | QGA14A20 | (GTTTT)5 | F: CGGGCTGGTTTTGATTTTTA | R: TGTCAAATCGTCACGTGGTT | 55 | 114 - 119 | 2 | 0.418 |
4 | SML-007 | QGG10L02 | (TCACCA)19 | F: ACACTTGCCGATTCCTTCAC | R: ACCCGTGTTGAAAATGGAGA | 55 | 184 - 202 | 3 | 0.519 |
5 | SML-013 | Cntg-4755 | (GAA)14…(CTG)5 | F: TCCCATGATGGAGAGACTCA | R: CCCAAAAGGGAATAGCAACC | 55 | 265 - 276 | 3 | 0.434 |
6 | SML-015 | Cntg-1438 | (TGTTA)16 | F: TTGAGGAGGGCATTTACGTC | R: GAGGCGTATCTCCAAGGTGT | 55 | 254 - 269 | 3 | 0.471 |
7 | SML-019 | Cntg-1238 | (ATATG)5 | F: AAGGAGGAAAGTATGGTGAGGA | R: TGAAATGAAGCAACACACGA | 55 | 163 - 168 | 2 | 0.375 |
8 | SML-020 | Cntg-419 | (AATG)6 | F: GTGGTCGTGATGATGCTTTG | R: TGCAATCCCTCTTTTCTTCAA | 55 | 223 - 227 | 2 | 0.141 |
9 | SML-038 | Cntg-4846 | (CCA)4 | F: ACCTCCTCCGTCACCAAGT | R: TCGCAAATTTTCTTGCCTTT | 55 | 189 - 192 | 2 | 0.291 |
10 | SML-039 | Cntg-5632 | (CCCCTT)2 | F: ATTACCCCTGGCCTTATGCT | R: TCGTATCTTGGCTGCTCCAT | 55 | 229 - 235 | 2 | 0.444 |
11 | SML-042 | Cntg-6454 | (CGGA)2 (AGGA)3 AAG (A)11* (GAAAGA)2 | F: CATGAAGTGTTTTGGGGTGA | R: GGCCTTTCATTTCTTCCTCA | 55 | 189 - 193 | 3 | 0.435 |
12 | SML-043 | Cntg-649 | (T)14 | F: TTCTTTCGCCCATCTGAAAC | R: AAACAGGGGGCTAACGATCT | 55 | 192 - 198 | 3 | 0.468 |
13 | SML-045 | Cntg-7478 | (AAG)9 | F: ACAAAACCGTTTCACCCAAA | R: AGCCCTGTCCTCTTCAGGAT | 55 | 220 - 226 | 3 | 0.375 |
14 | SML-048 | Cntg-7935 | (T)12 | F: TTTGAGGCAGGTGTTAGCTG | R: GAACAAAGTTACAACGAGAGGAAA | 55 | 114 - 123 | 3 | 0.337 |
15 | SML-051 | QGC13L24 | (TAA)8 | F: CTCAAGGCGGCATCTACTTC | R: GACCCCTTGCTTGTTTCAGA | 55 | 237 - 240 | 2 | 0.315 |
16 | SML-052 | Cntg-2202 | (CAT)5 | F: CTGTAGCCGGGAATTGAAGT | R: TGCCCCTAAACAAGACCTACA | 55 | 219 - 228 | 2 | 0.022 |
17 | SML-054 | Cntg-3649 | (TA)3 | F: CCATGCCATGCAGTATACCTT | R: AAAAATGACTGCATACTTTGTGAA | 55 | 269 - 271 | 3 | 0.529 |
18 | SML-055 | Cntg-3666 | (TGA)15…(ATG)9 | F: CTGCGTGTTTTAAGCCGTTT | R: TCCATAATAATATAATCGCACCAA | 55 | 224 - 239 | 2 | 0.378 |
19 | SML-056 | QGE4h11 | (TTA)14 | F: GCCTAGTCCAATTGCTTTGC | R: CAGCTTAACATACTTTTGTTCATTCA | 55 | 183 - 189 | 2 | 0.350 |
20 | SML-057 | QGB14L18 | (GAA)14…(CTG)5 | F: TCCCATGATGGAGAGACTCA | R: CCCAAAAGGGAATAGCAACC | 55 | 266 - 278 | 3 | 0.437 |
21 | SML-059 | Cntg-4454 | (TCT)12 | F: GATAAAGGCTGGACCGATGA | R: GTTTGGTTTGGTTTGGCAAG | 55 | 177 - 208 | 3 | 0.536 |
22 | SML-061 | Cntg-3414 | (AACA)6 | F: GAGTGCTGAGAAAGCCCAAG | R: TAAGCTGCTCTTCCCTCCTG | 55 | 203 - 207 | 2 | 0.402 |
23 | SML-021 | Cntg-1077 | (TA)8 | F: TTGGGAGAATTTTCATTTCCA | R: AGTCATCTTTTTCACCCCACA | 55 | 172 - 180 | 4 | 0.521 |
24 | SML-022 | Cntg-1211 | (ATC)13 | F: GGGCCTCAAATCCTCTCTG | R: TGTTCTTCCCCTCTTTGGAA | 55 | 314 - 338 | 4 | 0.511 |
25 | SML-026 | Cntg-2481 | (GAA)11 | F: GGGTTCTCATTGGCTGACAT | R: TGTCTTCCAACCAAAACATACA | 55 | 172 - 198 | 3 | 0.500 |
26 | SML-028 | Cntg-2789 | (A)15 | F: TGATCCAGGCTCTCCAGAAT | R: CACGACCATGAATGATAAGTGC | 55 | 170 - 181 | 3 | 0.511 |
27 | SML-032 | Cntg-3460 | (T)4 | F: TTGGATTTGGGGTGATGAAT | R: GCATAGTAATTTGACATTTTGGCATA | 55 | 215 - 216 | 2 | 0.465 |
28 | SML-036 | Cntg-4454 | (TCT)12… (CCAAA)4 | F: CTGCTGCTGTTTTGCTCTTG | R: CCTGAGGTGAGGTTGTCAAT | 55 | 214 - 217 | 2 | 0.137 |
29 | SML-037 | Cntg-4499 | (AAC)3 | F: TTTTTCCCGATCTTTGCATC | R: AGCGAATCTTTGCTTTTTCG | 55 | 211 - 214 | 2 | 0.282 |