SSR loci

Forward sequence

Reverse sequence

Repeat motif

Ta

Allele size (bp)

No. of alleles

MAF

GD

PIC

KNUPF-41

CCAAAATCTCCATGTTATTGCT

ACACACATCAGGCTTTCTCTCT

(AT)7

53

115 - 150

7

0.467

0.729

0.704

KNUPF-42

CGAATTCAATAGGGAAAAATGA

AGACTCAAATCATAGGAGTTTACGA

(AT)7

53

140 - 165

9

0.267

0.853

0.838

KNUPF-43

GTCAAATGAAATTCACACATTTTA

GTAAATGGGAATTTTTGAGGAG

(AT)7

51

145 - 155

6

0.467

0.720

0.690

KNUPF-44

ATCTCCACAGATTTCACTCCTG

AATTGATTTCGTTTTACGGAGA

(AT)7

53

155 - 165

6

0.533

0.667

0.637

KNUPF-45

AGACGTTGTGTACAAATTGACG

TCTGCACTCAAATATACAAGGC

(AT)7

52

160 - 165

2

0.733

0.391

0.315

KNUPF-46

AAATTTATTGGCGTGTATCGAG

TTGAATTTGCTGCAGTTGTATC

(TG)9

53

150 - 160

4

0.400

0.720

0.672

KNUPF-47

TCCAAAACCCTGATTCTGTAAC

AATTTGATCCATGGGATCTTC

(TG)9

53

215 - 225

6

0.467

0.693

0.652

KNUPF-48

TGTCCATAAATGTTCAACCAGA

TCACCTATCATTTTCCATTGTG

(AG)26

53

125 - 135

5

0.333

0.738

0.692

KNUPF-49

CTAGGTGTGGGTGATTTTCAAT

AAACTACCTACCACCATTTCCC

(AG)17

53

125 - 135

6

0.267

0.809

0.781

KNUPF-50

TCGTGAATGAGGGTGGTG

GCTGCTATTGGCATTTCTTATG

(CT)17

54

160 - 185

7

0.267

0.827

0.804

KNUPF-51

CCTCCTCTAATACATGTTTCTGC

TGCAGCTTCTGTTATCTTGAAA

(AG)22

52

175 - 185

6

0.533

0.667

0.637

KNUPF-52

AAGACTGCATCTTTCACCAACT

TTTCTTTATACACACATCGGCA

(CT)17

53

205 - 215

4

0.600

0.578

0.531

KNUPF-53

GATTCATCATTCAGCTCTCTCC

ATGACCAATGGATTAAACAAGG

(CT)17

53

205 - 220

7

0.200

0.827

0.803

KNUPF-54

GCCATTTGGAGATGGAATG

ATTTCGAGACAAAAGCAACAAT

(GC)5

53

140 - 150

4

0.400

0.711

0.660

KNUPF-55

TGCTGTTGATGACTTGTATGGT

ATGAGATTTGGCTTCACAGAGT

(AGC)7

53

240 - 250

6

0.333

0.773

0.740

KNUPF-56

CCTATGCATCCTTTCCAAATAA

TACGAGGTTCTGCAAGAAAAAT

(AGC)7

53

240 - 245

4

0.333

0.738

0.690

KNUPF-57

AGCAGCACTCTTCTTCTTGTTC

TCTGCAGAAGTTGTAGTCGATG

(ATC)7

53

170 - 175

2

0.533

0.498

0.374

KNUPF-58

GTATATGTGTGGGAAGGTTGCT

TCAATTTCCTCATCAAATCAAA

(ATG)7

53

215 - 220

3

0.600

0.551

0.485

KNUPF-59

AATCTCGATGCCTAACAACAGT

TTCCTTGTAAATCCAGCTAAGG

(CAG)7

53

140 - 150

4

0.600

0.578

0.531

KNUPF-60

GCAATGGACATCTGTGAGAGTA

AATTGTGGTAATCATAGGGCAG

(CAG)7

53

180 - 185

4

0.667

0.507

0.462

KNUPF-61

GGGATACCCAAATTTCTACCAT

TCATGAAAAATCCAAACATTCA

(CAG)7

53

220 - 225

4

0.600

0.560

0.501

KNUPF-62

CCATCCTTCTTGTTCAACTCAT

AATGTTGATGAGGAGACGTTTT

(CAT)7

53

185 - 190

4

0.467

0.667

0.610

KNUPF-63

AATGTATTTTCGGCAGAGAGAA

CGGAGTTCAGAGCAAAGATTAT

(CGT)7

53

145 - 150

6

0.400

0.711

0.666

KNUPF-64

TTTGAAGGTCTAACAGTGTCTGAA

AACTGAGATTTTGACCAAGCAG

(CTA)7

53

230 - 240

5

0.400

0.720

0.674

KNUPF-65

TAAATCAAGTTGGTAAGCATGG

CAGAAAACTACCTCCATATCGC

(CTA)7

52

240 - 245

3

0.400

0.658

0.584

KNUPF-66

GTCCTTTTGTCAAGAGACTGCT

CCTTCTCCCTTTGAAGAAAAGT

(GCT)7

53

235 - 245

4

0.467

0.613

0.537

KNUPF-67

ATTGATTCTCTATCAACCTGGC

CTCATCATCGGATCAACCTAGT

(GCT)7

53

225 - 240

7

0.467

0.729

0.704

KNUPF-68

GAGTGAAATGCTCGACTTGAT

CAAGTCTCATTCTTTCCAGACC

(GTA)7

52

150 - 155

4

0.467

0.676

0.623

KNUPF-69

TCTTCTCCAAGTCATGTCTTCTT

TGGAGTGGTCGAGAGAAGTAGT

(TCA)7

53

60 - 65

3

0.600

0.560

0.499

KNUPF-70

GAGATCAATAGTGGCAGTGGTT

AAACTAAACCAATGGCGTAGAA

(TCG)7

53

125 - 135

5

0.467

0.693

0.650

KNUPF-71

GAAGAATGCATCAGTAACACGA

ATGCTGGCCAAGTAATAAGAGA

(AGCT)4

53

190 - 200

6

0.333

0.791

0.762

KNUPF-72

TAATTTGAGGGATTCCTTTCCT

CGCCACCCTTACTACTTCATAC

(TCGA)4

53

235 - 245

4

0.400

0.711

0.660

KNUPF-73

CCATTCTTCAATTCGATCAACTA

TCTGCAAATCATCCAGTTAAAA

(CTAG)4

53

135 - 145

3

0.733

0.427

0.388

KNUPF-74

TTGACTGTACCAGAGCATCAAG

GGGTACACTCACAACTCTACCAA

(AAAT)6

53

185 - 200

7

0.467

0.729

0.704

KNUPF-75

CATATTCTCACCACCAAACTCC

GAGAAGAGAAGGAAGCAAACAA

(CTTT)7

53

160 - 180

6

0.400

0.738

0.700

KNUPF-76

AAAGTTTAGACAGCCCAACAAA

CTTAGCGTCAAGAAACAGCAG

(AGGG)6

53

210 - 215

5

0.600

0.587

0.547

KNUPF-77

TTTTTGGTTGCTTTTTCTTGAT

AGCAGATAAAATGTGCTGGATT

(TATG)10

53

155 - 165

4

0.467

0.649

0.586

Average

4.9

0.463

0.670

0.624