SSR loci | Forward sequence | Reverse sequence | Repeat motif | Ta | Allele size (bp) | No. of alleles | MAF | GD | PIC |
KNUPF-41 | CCAAAATCTCCATGTTATTGCT | ACACACATCAGGCTTTCTCTCT | (AT)7 | 53 | 115 - 150 | 7 | 0.467 | 0.729 | 0.704 |
KNUPF-42 | CGAATTCAATAGGGAAAAATGA | AGACTCAAATCATAGGAGTTTACGA | (AT)7 | 53 | 140 - 165 | 9 | 0.267 | 0.853 | 0.838 |
KNUPF-43 | GTCAAATGAAATTCACACATTTTA | GTAAATGGGAATTTTTGAGGAG | (AT)7 | 51 | 145 - 155 | 6 | 0.467 | 0.720 | 0.690 |
KNUPF-44 | ATCTCCACAGATTTCACTCCTG | AATTGATTTCGTTTTACGGAGA | (AT)7 | 53 | 155 - 165 | 6 | 0.533 | 0.667 | 0.637 |
KNUPF-45 | AGACGTTGTGTACAAATTGACG | TCTGCACTCAAATATACAAGGC | (AT)7 | 52 | 160 - 165 | 2 | 0.733 | 0.391 | 0.315 |
KNUPF-46 | AAATTTATTGGCGTGTATCGAG | TTGAATTTGCTGCAGTTGTATC | (TG)9 | 53 | 150 - 160 | 4 | 0.400 | 0.720 | 0.672 |
KNUPF-47 | TCCAAAACCCTGATTCTGTAAC | AATTTGATCCATGGGATCTTC | (TG)9 | 53 | 215 - 225 | 6 | 0.467 | 0.693 | 0.652 |
KNUPF-48 | TGTCCATAAATGTTCAACCAGA | TCACCTATCATTTTCCATTGTG | (AG)26 | 53 | 125 - 135 | 5 | 0.333 | 0.738 | 0.692 |
KNUPF-49 | CTAGGTGTGGGTGATTTTCAAT | AAACTACCTACCACCATTTCCC | (AG)17 | 53 | 125 - 135 | 6 | 0.267 | 0.809 | 0.781 |
KNUPF-50 | TCGTGAATGAGGGTGGTG | GCTGCTATTGGCATTTCTTATG | (CT)17 | 54 | 160 - 185 | 7 | 0.267 | 0.827 | 0.804 |
KNUPF-51 | CCTCCTCTAATACATGTTTCTGC | TGCAGCTTCTGTTATCTTGAAA | (AG)22 | 52 | 175 - 185 | 6 | 0.533 | 0.667 | 0.637 |
KNUPF-52 | AAGACTGCATCTTTCACCAACT | TTTCTTTATACACACATCGGCA | (CT)17 | 53 | 205 - 215 | 4 | 0.600 | 0.578 | 0.531 |
KNUPF-53 | GATTCATCATTCAGCTCTCTCC | ATGACCAATGGATTAAACAAGG | (CT)17 | 53 | 205 - 220 | 7 | 0.200 | 0.827 | 0.803 |
KNUPF-54 | GCCATTTGGAGATGGAATG | ATTTCGAGACAAAAGCAACAAT | (GC)5 | 53 | 140 - 150 | 4 | 0.400 | 0.711 | 0.660 |
KNUPF-55 | TGCTGTTGATGACTTGTATGGT | ATGAGATTTGGCTTCACAGAGT | (AGC)7 | 53 | 240 - 250 | 6 | 0.333 | 0.773 | 0.740 |
KNUPF-56 | CCTATGCATCCTTTCCAAATAA | TACGAGGTTCTGCAAGAAAAAT | (AGC)7 | 53 | 240 - 245 | 4 | 0.333 | 0.738 | 0.690 |
KNUPF-57 | AGCAGCACTCTTCTTCTTGTTC | TCTGCAGAAGTTGTAGTCGATG | (ATC)7 | 53 | 170 - 175 | 2 | 0.533 | 0.498 | 0.374 |
KNUPF-58 | GTATATGTGTGGGAAGGTTGCT | TCAATTTCCTCATCAAATCAAA | (ATG)7 | 53 | 215 - 220 | 3 | 0.600 | 0.551 | 0.485 |
KNUPF-59 | AATCTCGATGCCTAACAACAGT | TTCCTTGTAAATCCAGCTAAGG | (CAG)7 | 53 | 140 - 150 | 4 | 0.600 | 0.578 | 0.531 |
KNUPF-60 | GCAATGGACATCTGTGAGAGTA | AATTGTGGTAATCATAGGGCAG | (CAG)7 | 53 | 180 - 185 | 4 | 0.667 | 0.507 | 0.462 |
KNUPF-61 | GGGATACCCAAATTTCTACCAT | TCATGAAAAATCCAAACATTCA | (CAG)7 | 53 | 220 - 225 | 4 | 0.600 | 0.560 | 0.501 |
KNUPF-62 | CCATCCTTCTTGTTCAACTCAT | AATGTTGATGAGGAGACGTTTT | (CAT)7 | 53 | 185 - 190 | 4 | 0.467 | 0.667 | 0.610 |
KNUPF-63 | AATGTATTTTCGGCAGAGAGAA | CGGAGTTCAGAGCAAAGATTAT | (CGT)7 | 53 | 145 - 150 | 6 | 0.400 | 0.711 | 0.666 |
KNUPF-64 | TTTGAAGGTCTAACAGTGTCTGAA | AACTGAGATTTTGACCAAGCAG | (CTA)7 | 53 | 230 - 240 | 5 | 0.400 | 0.720 | 0.674 |
KNUPF-65 | TAAATCAAGTTGGTAAGCATGG | CAGAAAACTACCTCCATATCGC | (CTA)7 | 52 | 240 - 245 | 3 | 0.400 | 0.658 | 0.584 |
KNUPF-66 | GTCCTTTTGTCAAGAGACTGCT | CCTTCTCCCTTTGAAGAAAAGT | (GCT)7 | 53 | 235 - 245 | 4 | 0.467 | 0.613 | 0.537 |
KNUPF-67 | ATTGATTCTCTATCAACCTGGC | CTCATCATCGGATCAACCTAGT | (GCT)7 | 53 | 225 - 240 | 7 | 0.467 | 0.729 | 0.704 |
KNUPF-68 | GAGTGAAATGCTCGACTTGAT | CAAGTCTCATTCTTTCCAGACC | (GTA)7 | 52 | 150 - 155 | 4 | 0.467 | 0.676 | 0.623 |
KNUPF-69 | TCTTCTCCAAGTCATGTCTTCTT | TGGAGTGGTCGAGAGAAGTAGT | (TCA)7 | 53 | 60 - 65 | 3 | 0.600 | 0.560 | 0.499 |
KNUPF-70 | GAGATCAATAGTGGCAGTGGTT | AAACTAAACCAATGGCGTAGAA | (TCG)7 | 53 | 125 - 135 | 5 | 0.467 | 0.693 | 0.650 |
KNUPF-71 | GAAGAATGCATCAGTAACACGA | ATGCTGGCCAAGTAATAAGAGA | (AGCT)4 | 53 | 190 - 200 | 6 | 0.333 | 0.791 | 0.762 |
KNUPF-72 | TAATTTGAGGGATTCCTTTCCT | CGCCACCCTTACTACTTCATAC | (TCGA)4 | 53 | 235 - 245 | 4 | 0.400 | 0.711 | 0.660 |
KNUPF-73 | CCATTCTTCAATTCGATCAACTA | TCTGCAAATCATCCAGTTAAAA | (CTAG)4 | 53 | 135 - 145 | 3 | 0.733 | 0.427 | 0.388 |
KNUPF-74 | TTGACTGTACCAGAGCATCAAG | GGGTACACTCACAACTCTACCAA | (AAAT)6 | 53 | 185 - 200 | 7 | 0.467 | 0.729 | 0.704 |
KNUPF-75 | CATATTCTCACCACCAAACTCC | GAGAAGAGAAGGAAGCAAACAA | (CTTT)7 | 53 | 160 - 180 | 6 | 0.400 | 0.738 | 0.700 |
KNUPF-76 | AAAGTTTAGACAGCCCAACAAA | CTTAGCGTCAAGAAACAGCAG | (AGGG)6 | 53 | 210 - 215 | 5 | 0.600 | 0.587 | 0.547 |
KNUPF-77 | TTTTTGGTTGCTTTTTCTTGAT | AGCAGATAAAATGTGCTGGATT | (TATG)10 | 53 | 155 - 165 | 4 | 0.467 | 0.649 | 0.586 |
|
|
|
|
| Average | 4.9 | 0.463 | 0.670 | 0.624 |