| Genus | Number of sequences Bacitracin (%) | Number of sequences Control (%) | Number of sequences Zeolite (%) | Phylum | |||
| Lactobacillus | 88,795 | (45.09) | 137,938 | (66.91) | 182,205 | (92.40) | Firmicutes |
| Enterococcus | 56,333 | (28.61) | 13,515 | (6.56) | 1209 | (0.61) | Firmicutes |
| Clostridium | 13,686 | (6.95) | 17,809 | (8.63) | 1561 | (0.79) | Firmicutes |
| Shigella | 6886 | (3.50) | 2700 | (1.31) | 79 | (0.04) | Proteobacteria |
| Escherichia | 6855 | (3.48) | 2720 | (1.31) | 104 | (0.05) | Proteobacteria |
| Klebsiella | 1788 | (0.90) | 419 | (0.20) | 2 | (0.00) | Proteobacteria |
| Brevibacterium | 1029 | (0.52) | 351 | (0.17) | 146 | (0.07) | Proteobacteria |
| Enterobacter | 1027 | (0.52) | 190 | (0.09) | 12 | (0.00) | Proteobacteria |
| Staphylococcus | 875 | (0.44) | 1023 | (0.49) | 274 | (0.14) | Proteobacteria |
| Brachybacterium | 765 | (0.39) | 737 | (0.36) | 25 | (0.01) | Proteobacteria |
| Corynebacterium | 757 | (0.38) | 1892 | (0.92) | 271 | (0.14) | Proteobacteria |
| Aquabacterium | 255 | (0.13) | 491 | (0.24) | 144 | (0.07) | Proteobacteria |
| Blautia | 137 | (0.07) | 110 | (0.05) | 22 | (0.01) | Proteobacteria |
| Pseudomonas | 87 | (0.04) | 210 | (0.10) | 57 | (0.03) | Proteobacteria |
| Pantoea | 52 | (0.03) | 11 | (0.00) | 19 | (0.01) | Actinobacteria |
| Comamonas | 50 | (0.02) | 104 | (0.05) | 46 | (0.02) | Actinobacteria |
| Anaerostipes | 37 | (0.02) | 29 | (0.01) | 8 | (0.00) | Actinobacteria |
| Bacillus | 36 | (0.02) | 13 | (0.00) | 1310 | (0.66) | Actinobacteria |
| Yaniella | 33 | (0.01) | 15 | (0.00) | 2 | (0.00) | Actinobacteria |
| Micrococcus | 26 | (0.01) | 2 | (0.00) | 19 | (0.01) | Actinobacteria |
| Burkholderia | 23 | (0.01) | 2 | (0.00) | 34 | (0.02) | Actinobacteria |
| Proteus | 23 | (0.01) | 62 | (0.03) | 0 | (0.00) | Actinobacteria |
| Fusicatenibacter | 21 | (0.01) | 43 | (0.02) | 24 | (0.01) | Bacteroidetes |
| Bacteroides | 20 | (0.01) | 37 | (0.02) | 25 | (0.01) | Bacteroidetes |
| Alistipes | 19 | (0.00) | 17 | (0.00) | 9 | (0.00) | Firmicutes |
| Mitsuaria | 18 | (0.00) | 14 | (0.00) | 32 | (0.02) | Firmicutes |
| Caulobacter | 12 | (0.00) | 27 | (0.01) | 42 | (0.02) | Firmicutes |
| Arthrobacter | 12 | (0.00) | 11 | (0.00) | 24 | (0.01) | Firmicutes |
| Acinetobacter | 8 | (0.00) | 22 | (0.01) | 20 | (0.01) | Firmicutes |
| Novosphingobium | 6 | (0.00) | 17 | (0.00) | 59 | (0.03) | Firmicutes |
| Marvinbryantia | 6 | (0.00) | 11 | (0.00) | 10 | (0.00) | Firmicutes |
| Roseburia | 6 | (0.00) | 4 | (0.00) | 5 | (0.00) | Firmicutes |
| Streptococcus | 4 | (0.00) | 5986 | (2.90) | 393 | (0.2) | Firmicutes |
| Janibacter | 4 | (0.00) | 6 | (0.00) | 62 | (0.03) | Firmicutes |
| Coprococcus | 3 | (0.00) | 5 | (0.00) | 6 | (0.00) | Firmicutes |
| Brevibacillus | 2 | (0.00) | 2 | (0.00) | 110 | (0.06) | Firmicutes |
| Hespellia | 2 | (0.00) | 11 | (0.00) | 2 | (0.00) | Firmicutes |
| Lactococcus | 2 | (0.00) | 255 | (0.12) | 35 | (0.02) | Firmicutes |
| Rothia | 0 | (0.00) | 14 | (0.00) | 5 | (0.00) | Firmicutes |
| Weissella | 0 | (0.00) | 164 | (0.08) | 14 | (0.00) | Firmicutes |