| Station ID | USGS Station Name | Short Name | Record Start | Record End | Location |
| 5357215 | Allequash Creek at Cty Hwy M Nr Boulder Junction | Allequash | 1991 | 2023 | north |
| 5405000 | Baraboo River Near Baraboo | Baraboo | 1942 | 2023 | central |
| 5357335 | Bear River Near Manitowish Waters | Bear | 1991 | 2023 | north |
| 5431486 | Little Turtle Crk at Carvers Rock Rd N Clinton | Clinton | 1939 | 2023 | south |
| 4026349 | North Fish Creek Near Moquah | Fish | 1989 | 2015 | north |
| 5543830 | Fox River at Waukesha | Fox | 1963 | 2023 | south |
| 5413500 | Grant River at Burton | Grant | 1934 | 2023 | south |
| 5408000 | Kickapoo River at La Farge | Kickapoo | 1938 | 2023 | central |
| 4087120 | Menomonee River at Wauwatosa | Menomonee | 1961 | 2023 | south |
| 5414000 | Platte River Near Rockville | Platte | 1934 | 2023 | south |
| 5394500 | Prairie River Near Merrill | Prairie | 1914 | 2023 | north |
| 5432500 | Pecatonica River at Darlington | Pecatonica | 1939 | 2023 | south |
| 5382325 | La Crosse River at Sparta | Sparta | 1992 | 2023 | central |
| 5393500 | Spirit River at Spirit Falls | Spirit | 1942 | 2023 | north |
| 4027500 | White River Near Ashland | White | 1948 | 2023 | north |
| 5429500 | Yahara River at Mc Farland | Yahara | 1930 | 2023 | south |
| 5402000 | Yellow River at Babcock | Yellow | 1997 | 2023 | central |