Target | Primer sequence (5’ to 3’) | TAa (˚C) | Size (bp) | |
Multiplex PCR | ||||
blaTEM | F | GAAGATCAGTTGGGTGCACGAGT | 59 | 520 |
R | CAACTTTATCCGCCTCCATCCAGT | |||
blaSHV | F | AACGGAACTGAATGAGGCGCT | 59 | 141 |
R | TCCACCATCCACTGCAGCAGCT | |||
blaCTX-M-3 | F | AATCACTGCGCCAGTTCACGCT | 59 | 479 |
R | GAACGTTTCGTCTCCCAGCTGT | |||
blaCTX-M-14 | F | TACCGCAGATAATACGCAGGTG | 59 | 355 |
R | CAGCGTAGGTTCAGTGCGATCC | |||
blaDHA | F | AACTTTCACAGGTGTGCTGGGT | 59 | 405 |
R | CCGTACGCATACTGGCTTTGC | |||
blaVIM | F | GTTTGGTCGCATATCGCAAC | 57 | 147 |
R | CTTYTCAATCTCCGCGAGAAG | |||
blaIPM-1 | F | GGAATAGAGTGGCTTAATTCTCAATC | 57 | 272 |
R | GCTTCTAAATTTGCGTCACCC | |||
blaIPM-2 | R | GYAACCAAACCACTACGTTATCT | 57 | 193 |
blaSPM | F | ATGAACTCACCTAAATCGAGAGC | 57 | 340 |
R | GTGCCGTCCAAATGAAAGTG | |||
blaSIM | F | GGCTTAGTAGTTCTTGACAATCAC | 57 | 516 |
R | CAATAGTGATGCGTCTCCGA | |||
blaGIM | F | TGTAGCGTTGCCAGCTTTAG | 57 | 431 |
R | CAGCACCTGGATAGTAGAGC | |||
blaKHM | F | CGTTTGGTCTGCTGTTGTTTAC | 57 | 322 |
R | GGAATGGACTTGGAGTTGAGAA | |||
blaNDM | F | ACTTATGCCAATGCGTTGTC | 57 | 225 |
R | TCTGTCCTTGATCAGGCAG | |||
Single PCR | ||||
KP16S | F | AGCACAGAGAGCTTG | 50 | 126 |
R | ACTTTGGTCTTGCGAC | |||
blaCMY-2 | F | CTGACAGCCTCTTTCTCCACA | 56 | 1005 |
| R | CTACGTAGCTGCCAAATCCAC |
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blaKPC | F | TGTCACTGTATCGCCGTC | 54 | 1000 |
R | CTCAGTGCTCTACAGAAAACC | |||
OmpK35 | F | TGATCCCTGCCCTGCTGGT | 56 | 717 |
R | CCGGAGTCATGTTGTAAGTCT |