| Gene | Primer name | Primer sequence | Expected size (bp) |
| QnrA | qnrA-F | TCAGCAAGAGGATTTCTCA | 627 |
| qnrA-R | GGCAGCACTATTACTCCCA | ||
| QnrB | qnrB-F | GATCGTGAAAGCCAGAAAGG | 476 |
| qnrB-R | ACGATGCCTGGTAGTTGTCC | ||
| QnrS | qnrS-F | ATGGAAACCTACAATCATAC | 491 |
| qnrS-R | AAAAACACCTCGACTTAAGT | ||
| Aac (6')Ib-cr | aac (6')Ib-cr-F | TTGCGATGCTCTATGAGTGGCTA | 482 |
| aac (6')Ib-cr-R | CTCGAATGCCTGGCGTGTTT | ||
| QepA | qepA-F | GCAGGTCCAGCAGCGGGTAG | 199 |
| qepA-R | CTTCCTGCCCGAGTATCGTG | ||
| GyrA | gyrA-F | CGACCTTGCGAGAGAAAT | 625 |
| gyrA-R | GTTCCATCAGCCCTTCAA | ||
| parC-E. coli | parC-E-F | AAACCTGTTCAGCGCCGCATT | 395 |
| parC-E-R | GTGGTGCCGTTAAGCAAA | ||
| parC-Klebsiella | parC-K-F1 | CTGAATGCCAGCGCCAAATT | 389 |
| parC-K-R1 | TGCGGTGGAATATCGGTCGC |