Plants

Parameter

Size of SCAR marker

RAPD primer

SCAR primer

Applications

Links

Saccharomyces cerevisiae

(Wang et al., 2011)

Bacterial strain

S1308 (5’-CTGTCTGTG-3’)

A1 (5’-CTGTCTGTGGGAAATACGAACC-3’)

A2 (5’-CTGTCTGTGGACCTAAAACGCT-3’)

C3 (5’-GAACGAACTGTCTGTGGTAGTGC-3’),

C4 (5’-GAACAGAACTGTCTGTGGTAGTGC-3’)

To select hybrid strains of Saccharomyces cerevisiae

10.1007/s11274-010-0430-7

Pisum sativum L.

( Srivastava et al., 2012)

Leaves, Stipules

880 bp

OPX 04 (5’-CCGCTACCGA-3’)

ScOPX 04 880

(5’-CCGCTACCGATGTTATGTTTG-3’)

(5’-CCGCTACCGAACTGGTTGGA-3’)

SCAR marker linked to powdery mildew resistance gene er1 in pea

10.1007/s10681-012-0650-z

Liriope platyphylla & Ophiopogon japonicas

(Li and Park, 2012)

Leaves, Tuber

485 bp

460 bp

553 bp

OPA-06 F, (5’-GGTCCCTGAC-3’)

OPA-06 R, (5’-GGTCCCTGAC-3’)

SA12 F (5’-TCGGCGATAGTGTAGGATATG-3’)

SA12 R (5’-TCGGCGATAGAGGTGATACA-3’)

SA06 F (5’-GGTCCCTGACTATATCGTGTT-3’)

SA06 R (5’-GGTCCCTGACACATACACATG-3’)

SB05 F (5’-TGCGCCCTTCAAACAAAACAAG-3’)

SB05 R (5’-TGCGCCCTTCCCCAGGTAAC-3’)

Identification of closely related medicinal plant species

10.1186/2193-1801-2-501

Hippophae rhamnoides L.

(Korekar et al., 2012)

Leaves

470 bp

OPA-04 (5’-AATCGGGCTG-3’

OPT06 (5’-CAAGGGCAGA-3’)

OPA-04(FS)F(5’-TATGAGCTCTCGACTGACAGCCA-3’)

OPA-04(FS)R(5’-CTDTTGTCCGAGATGACGCGT-3’)

To determine the sex of seabuckthorn plants in early stage

10.1007/s10529-012-0852-4

Fusarium oxysporium f. sp. ciceris

(Durai et al., 2012)

Mycelia

OPA 11 (5’-CAATCGCCGT-3’)

OPA 7 (5’-GAAACGGGTG-3’)

SC-FOC1 F-(5’-CCTCGCCAGCCTTGTACTTGCG-3’)

SC-FOC1 R-(5’-CGGTACCGGATGGCCCTGCAA-3’)

SC-FOC2 F-(5’-ATGGCTCAGTGAGGCGTCCGGA-3’)

SC-FOC2 R-(5’-GTGTGGGGGATAGAGCATTG-3’)

Detection of Fusarium oxysporium f. sp. causing wilt in chickpea

10.1007/s12223-012-0118-5

Rhizoctonia solani

(Ganeshamoorthi and Dubey, 2013)

Root

285 bp

OPA 11 (5’-CAATCGCCGT-3’)

SCAR-GSF (5’-GTGGA ACCAA GCATA ACACT GA-3’)

SCAR-GS R (5’-AGTTT CAACA ACGGA TCTTT GG-3’)

Detection of wet root rot pathogen in chickpea

10.5897/AJB2013.12439

Dimocarpus longan

(Yang et al., 2013)

Leaves

SBS-14

SBS-Q12

SBS-Q19

LY2-1 L (5’-AACTGGAAGTCCCTGGTCCT-3’)

LY2-1 R (5’-ACAAGAGGCCCCAGTAAGGT-3’)

LY4-7L (5’-GGCGCCGGTATACTTTGTAA-3’)

LY4-7R (5’-CTCGTAAGAGGATCCGTCCA-3’)

LY4-8 L (5’-CCCCATCTGGTTGTAGCATC-3’)

LY4-8R (5’-AGCCAGCTCAACCAACTCAT-3’)

LY5-2 L (5’-TTTTAATGTTGGGCATTTGG-3’)

LY5-2R (5’-GCTAACCGAGATCCACTAACG-3’)

Dimocarpus longan variety authantication

10.1186/2193-1801-2-501

Oryza sativa L.

(Semsang et al., 2013)

Seed

218 bp

OPO07 (5’-CAGCACTGAC-3’)

BO07F1(5’-TGTCTACGTTGGCTTCGCCATCACCG-3’)

BO07R1(5’-ATGCTAACCATG TATTAGTCATG-3’)

Discrimination of Thai jasmine rice mutants

10.4236/ajps.2013.49218

Sorghum halepense L.

(Zhang et al., 2013)

Seeds

CP3 (5’-GTGTTGACGAGATTTCTGTT-3’)

CP4 (5’-GGGTTGCTAACTCAATGGTA-3’)

SH1 (5’-AGATTGAGTCTCAGGTGC-3’)

SH2 (5’-GAGTCTCAGGGTATGATCT-3’)

To distinguish S. halepense and its relatives

http://www.notulaebotanicae.ro/index.php/nbha/view/9001

Idesia polycarpa Maxim.

(Wang et al., 2014)

Leaves

200 bp

me14 (5’-TGAGTCCAAACCGGAGT-3’)

em18 (5’-GACTGCGTACGAATTTCA-3’)

TZS1 (5’-TGAGTCCAAA CCGGAGTAAA-3’)

TZS2 (5’-CAATTCAGGG ATTTAACCAC-3’)

Early sexual identification in Idesia polycarpa

10.4238/2015.March.20.11

Rosa indica

(Bashir et al., 2014)

Leaves

391 bp

GLB-15 (5’-GGAGGGTGTT-3’)

Forward: (5’-CTAGGAATTAGGGTGTCTAGG-3’)

Reverse: (5’-CTGAGGTCTTGAGTCTCAGG-3’)

Identification and authentication of Rosa species

10.4238/2014.May.30.8

Lactobacillus plantarum

(Liu et al., 2015)

Strains

680 bp

S116 ( 5’-TCTCAGCTGG-3’)

SA1 (5’-TCTCAGCTGGCACAAGGTGTTG-3’)

SA2 (5’-TCTCAGCTGGCATTGGATTTTC-3’)

To determine acid resistance related gene in Lactobacillus plantarum

10.1007/s00792-014-0721-2