| Gene | Primer name | Sequence (5' to 3') | Annealing T (˚C) | Reference |
| ESBLs |
|
|
|
|
| blaSHV | SHV-F | TTATCTCCCTGTTAGCCACC | 58 | [19] |
| SHV-R | GATTTGCTGATTTCGCTCGG | |||
| blaTEM | TEM-F | GCGGAACCCCTATTTG | 55 | [19] |
| TEM-R | ACCAATGCTTAATCAGTGAG | |||
| blaCTX-M1 | CTX-M 1-F | GGTTAAAAAATCACTGCGTC | 56 | [19] |
| CTX-M1-R | TTGGTGACGATTTTAGCCGC | |||
| blaCTX-M2 | CTX-M2-F | GATGAGACCTTCCGTCTGGA | 61 | [19] |
| CTX-M2-R | CAGAAACCGTGGGTTACGAT | |||
| blaCMY-2 | CMY-2 F | ATGATGAAAAAATCGTTATGCTGC | 62 | [19] |
| CMY-2 R | GCTTTTCAAGAATGCGCCAGG | |||
| AmpC | AmpC-F | ATGATGAAAAAATCGTTATGC | 56 | [19] |
| AmpC-R | TTGCAGCTTTTCAAGAATGCGC | |||
| ExPEC-associated virulence genes |
|
| ||
| fimC | fimC-F | TAAGGAAATCGCAGGAA | 52.0 | [20] |
| fimC-R | GTCAGGTAATAGGGTGTCG | |||
| ompA | ompA-F | TTTTGGATGATAACGAGG | 50.0 | [20] |
| ompA-R | TGCTGGGTAAGGAATAAC | |||
| betA | betA-F | CGGTTTCGGCGTGGTTAC | 60.0 | [20] |
| betA-R | GTGGGCATGTGCGGATTA | |||
| ibeA | ibeA-F | AGGCAGGTGTGCGCCGCGTAC | 58.0 | [20] |
| ibeA-R | TGGTGCTCCGGCAAACCATGC | |||
| rfaH | rfaH-F | TGTATCGCAACACGCACG | 54.0 | [20] |
| rfaH-R | AAAACCAGTCGAGCCTTC | |||
| irp2 | irp2-F | AAGGATTGCCTGTTACCGGAC | 52.0 | [20] |
| irp2-R | TCGTCGGGCAGCGTTTCTTCT | |||
| fyuA | fyuA-F | GCTTTATCCTCTGGCCTT | 52.0 | [20] |
| fyuA-R | GGCATATTGACGATTAAC | |||