| Phylum | Family | Genus | % of total (Pre FMT) | % of total (Post FMT) |
| Firmicutes (gram+) | Lachnospiraceae | Anaerostipes | 7.92* | 0.09 |
|
|
| Coprococcus | 0.72 | 1.66 |
|
|
| Dorea | 6.85 | 0.61 |
|
|
| Moryella | 0 | 0 |
|
|
| Roseburia | 32.11 | 3.01 |
|
|
| Sporobacterium | 0 | 0 |
|
|
| Syntrophococcus | 0 | 0 |
|
| Ruminococcaceae | Acetanaerobacterium | 0 | 0 |
|
|
| Acetivibrio | 1.22* | 0 |
|
|
| Ethanoligenens | 0 | 0 |
|
|
| Faecalibacterium | 0.08 | 5.65 |
|
|
| Papillibacter | 0 | 0 |
|
|
| Ruminococcus | 1.27* | 4.51 |
|
|
| Sporobacterium | 0 | 0 |
|
|
| Subdoligranulum | 0.17 | 0 |
|
| Clostridiaceae | Butyricicoccus | 0 | 0 |
|
|
| Clostridium | 0 | 1.58 |
|
|
| Lactonifactor | 0.08* | 0 |
|
| Eubacteriaceae | Naaerofustis | 0 | 0 |
|
|
| Eubacterium | 0 | 4.91* |
|
| Blautia | Blautia | 21.51 | 10.92 |
|
| Howardella | Howardella | 0 | 0 |
|
| Lactobacillaceae | Lactobacillus | 0.2 | 0.25 |
|
| Enterococcaceae | Enterococcus | 0 | 0.03* |
|
| Streptococcaceae | Lactococcus | 0 | 0 |
|
|
| Streptococcus | 26.39* | 0.15 |
|
| Leuconostocaceae | Leuconostoc | 0 | 0.01 |
|
| Erysipelotrichaceae | Catenibacterium | 0 | 0 |
|
|
| Coprobacillus | 0.54 | 0.5 |
|
|
| Holdemania | 0 | 0 |
|
|
| Turicibacter | 0* | 0.04* |
|
| Veillonellaceae | Dialistr | 0 | 0 |
|
|
| Megamonas | 0 | 0 |
|
|
| Megasphaera | 0 | 2.26* |
|
| Oscillospiaceae | Oscillibacter | 0.29 | 0 |
|
| Staphlococcaceae | Staphylococcus | 0 | 0 |
| Bacteroidetes (gram−) | Bacteroidaceae | Bacteroides | 0.42 | 21.11* |
|
| Rikenellaceae | Alistipes | 0 | 0 |
|
| Porphyromonadaceae | Barnesiella | 0 | 0 |
|
|
| Odoribacter | 0 | 0.04 |
|
|
| Parabacteroides | 0 | 1.04 |