| Molecules | Artemisinin | Quinine | A(B) | C | D | E | F | |||||||
| Acceptor(s) of HB | sites | Vs | sites | Vs | sites | Vs | sites | Vs | sites | Vs | sites | Vs | sites | Vs |
| O13 | −58.76 | O39 | −58.66 | O11 | −58.54 | O11 | −58.63 | O11 | −58.60 | O11 | −58.58 | O11 | −58.62 | |
| O30 | −58.67 | O22 | −58.54 | O15 | −58.57 | O15 | −58.61 | O15 | −58.60 | O15 | −58.59 | O15 | −58.60 | |
| O20 | −58.61 | O20 | −58.59 | O20 | −58.65 | O20 | −58.65 | O20 | −58.61 | |||||
| Donor(s) of HB | C11H | −2.76 | O22H | −2.61 | O22H | −2.57 | C3H | −2.87 | N31H2 | −2.68 | N24H | −2.68 | C25H3 | −2.86 |
| O46H | −2.50 | |||||||||||||