Cancer Type

Classifier

SNP Type

Precision

Recall

F1-Score

Accuracy

Combine Cancers

SVM Linear

Polymorphic

0.86

0.98

0.91

Detrimental

0.15

0.02

0.04

0.84

SVM RBF

Polymorphic

0.87

0.97

0.92

Detrimental

0.49

0.16

0.25

0.86

SVM Polynomial

Polymorphic

0.86

0.98

0.92

Detrimental

0.45

0.08

0.13

0.85

Random Forest

Polymorphic

0.9

0.96

0.93

Detrimental

0.6

0.35

0.45

0.87

Single Instance

SVM Linear

Polymorphic

0.77

0.84

0.8

0.69

Detrimental

0.24

0.18

0.21

SVM RBF

Polymorphic

0.8

0.85

0.82

0.72

Detrimental

0.34

0.27

0.3

SVM Polynomial

Polymorphic

0.79

0.93

0.85

0.75

Detrimental

0.39

0.14

0.21

Random Forest

Polymorphic

0.82

0.82

0.82

0.73

Detrimental

0.39

0.4

0.4

Balanced Data

SVM Linear

Polymorphic

0.83

0.99

0.9

Detrimental

0.93

0.79

0.88

0.89

SVM RBF

Polymorphic

0.82

0.95

0.88

Detrimental

0.94

0.79

0.86

0.87

SVM Polynomial

Polymorphic

0.63

0.89

0.74

Detrimental

0.81

0.47

0.6

0.68

Random Forest

Polymorphic

0.83

0.92

0.87

Detrimental

0.91

0.81

0.86

0.87