PCR assay | Primers | Sequences |
HLA assay | GH26 Forward | 5’-GTGCTGCAGGTGTAAACT-3’ |
GH27 Reverse | 5’-CACGGATCCGGT-3’ | |
gag | GAG1 Forward | 5’-GGTACATCAGGCCATATCACC-3’ |
GAG4 Reverse | 5’-ACCGGTCTACATAGTCTC-3’ | |
pol | POLITG1 Forward | 5’-CCCTACAATCCCCAAAGTCAAGG-3’ |
POLITG4 Reverse | 5’-TACTGCCCCTTCACCTTTCCA-3’ | |
env | ENV1 Forward | 5’-GAGGATATAATCAGTTTATGG-3’ |
ENV4 Reverse | 5’-AATTCCATGTGTACATTGTACTG-3’ | |
Nested gag | GAG2 Forward | 5’-GAGGAAGCTGCAGAATGGG-3’ |
GAG3 Reverse | 5’-GGTCCTTGTCTTATGTCC-3’ | |
Nested pol | POLITG2 Forward | 5’-TAAGACAGCAGACAAATGGCAG-3’ |
POLITG3 Reverse | 5’-GCTGTCCCTGTAATAAACCCG-3’ | |
Nested env | ENV2 Forward | 5’-GATCAAAGCCTAAAGCCATG-3’ |
ENV3 Reverse | 5’-CAATAATGTATGGGAATTGG-3’ |