Bacteria

Target gene

Serogroup

Sense primers

Anti primers-sense

Probes

N. meningitidis

sodC

(Nm)

F351: GCACACTTAGGTGAT TTACCTGCA

R478: CCACCCGTGTGGATCATA ATAGA

Pb387: CATGATGGCACAGCAA-CAAATC CTGTTT5'FAM, 3'BHQ

csaB

NmA

F2531: AAAATTCAATGGGTATATCACGAA-GA

R2624: TATGGTGCAAG CTGGTTTCAATAG

Pb2591i: CTAAAAG- “T” AGG AAGGGCACTTTGTGGCATAAT5'FAM; 3'SpC6; “T” BHQ1

csc

NmC

F478: CCCTGAGTATGCGAAAAAAATT

R551: TGCTAATCCCGCCTGAATG

Pb495i: TTTCAATGC“T” AATGAATACC- ACCGTTTTTTTGC5'FAM; 3'SpC6; “T” BHQ1

csw

NmW

F857: TATTTATGGAAGGCATGGTGTATG

R964: TTGCCATTCCAGA AATATCACC

Pb907i: AAATATGGAGCGAA “T” GATTACAGTAACTATAATGAA5'FAM, 3'SpC6, “T” BHQ1,

csxB

NmX

F173: TGTCCCCAAC-CGTTTATTGG

R237: TGCTGCTATCATAGCCGCC

Pb196i: TGTTTGCCC-A CATGAATGGCGGFAM; 3'BHQ

csy

NmY

F787: TCCGAGCAGGAAATTTATGAGAATAC

R929: TTGCTAAAATCATTCGCTCCATAT

Pb1099i: TATGGTG “T-” ACGATATCCCTAT-CCTTGCCTATAAT5'FAM; 3'SpC6; “T” BHQ1

H. influenzae b

hpd3 (Hi)

Hi

hpdF822: GGTTAAATATGCCGATGGTGTTG

hpdF952: TGCATCTTTACGCACGGTGTA

Pb896i: TTGTGTACACTCCGT “T” GGTAAAAGAACTTGCAC

bcsC

Hib

F192: TGATGCATTGAAAGAAGGT-GTAATTT

R359: CCTGCGGTAATAACATGATC-ATAAA

Pb244i: TGTCGTGCAGTAGCAAACCGTAACCTTACTC

S. pneumoniae

lytA

(S.pn)

F373: ACGCAATCTAGCAGA TGA -AGC A

R424: TCGTGCGTTTTAATTCCAGCT

Pb400: TGCCGAAAACGC “T” TGATACAGGGAG5'FAM; “T” BHQ; 3'SpC6