Location/type

H. annuus 2023B

Common sites in 2023B

Unique sites in 2023B

H. annuus ID25

Common sites in ID25

Unique sites in ID25

H. annuus TX16R

Common sites in TX16R

Unique sites in TX16R

C

I

C

I

C

I

C

I

C

I

C

I

Protein coding transcripts

170

170

158

12

12

168

168

166

2

2

175

177

169

6

8

First codon position

53

52

50

3

2

53

52

52

1

0

50

52

50

0

2

Second codon position

97

94

90

7

4

97

96

96

1

0

99

101

96

3

5

Third codon position

20

24

18

2

6

18

20

18

0

2

26

24

23

3

1

Creation of start codon

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Substitution of start codon

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Creation of stop codon

1

2

1

0

1

1

1

1

0

0

1

1

1

0

0

Substitution of a stop codon

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Non-synonymous substitutions

149

145

139

10

6

149

147

147

2

0

149

153

146

3

7

Synonymous substitutions

21

25

19

2

6

19

21

19

0

2

26

24

23

3

1

Non-protein coding transcripts

194

220

176

18

44

207

219

192

15

27

238

230

207

31

23

tRNA

3

3

3

0

0

3

3

3

0

0

3

3

3

0

0

rRNA

3

3

2

1

1

3

2

2

1

0

5

3

2

3

1

Long noncoding RNA

0

0

0

0

0

0

0

0

0

0

0

0

0

0

0

Intergenic region

188

214

171

17

43

201

214

187

14

27

230

224

202

28

22

Total no of sites

364

390

334

30

56

375

387

358

17

29

413

407

376

37

31