| Sequenced Clones (accession number) | Number of clonesa | GenBank closest match (accession number) | Identity (%) | Class | Family |
| EDL 933 added microcosm |
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| 1 (JX667699) | 1 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 3 (JX667700) | 1 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 7 (JX667701) | 1 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 8 (JX667702) | 2 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 11 (JX667687) | 2 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 18 (JX667703) | 22 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 2 (JX667685) | 3 | Dexitrichides pangi (AY212805) | 95 | Oligohymenophorea | Philasteridae |
| 4 ((JX667686) | 22 | Vorticella fusca (JN120230) | 98 | Oligohymenophorea | Vorticellidae |
| 48 (JX667704) | 1 | Vorticella fusca (JN120230) | 98 | Oligohymenophorea | Vorticellidae |
| 13 (JX667688) | 1 | Opisthonecta henneguyi (JN120201) | 97 | Oligohymenophorea | Opisthonectidae |
| Control microcosm at day 0 |
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| 6A (JX667691) | 5 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 50A (JX667695) | 10 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 51B (JX667698) | 6 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 34B (JX667690) | 3 | Prorodon teres (X71140) | 96 | Prostomatea | Prorodontidae |
| 17A (JX667692) | 21 | Epistylis wenrichi (AF335515) | 93 | Oligohymenophorea | Epistylidae |
| 27A (JX667693) | 19 | Epistylis wenrichi (AF335515) | 97 | Oligohymenophorea | Epistylidae |
| 49A (JX667694) | 5 | Epistylis wenrichi (AF335515) | 95 | Oligohymenophorea | Epistylidae |
| 5B (JX667689) | 3 | Epistylis wenrichi (AF335515) | 97 | Oligohymenophorea | Epistylidae |
| 7B (JX667696) | 4 | Epistylis wenrichi (AF335515) | 96 | Oligohymenophorea | Epistylidae |
| 20B (JX667697) | 3 | Epistylis wenrichi (AF335515) | 97 | Oligohymenophorea | Epistylidae |