Genes and primer names | Sequences | Annealing temperature (˚C) | Product size (bp) | Primer length (bp) |
EGFR |
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EGFR-ex18-pF | 5'-CCGGAGTTTTCAATCCAGTT-3' | 64 | 278 | 20 |
EGFR-ex18-pR | 5'-GTCAATGGCCCCTTTCATAA-3' | 20 | ||
EGFR-ex19-pF | 5'-TGGATGAAATGATCCACACG-3' | 64 | 250 | 20 |
EGFR-ex19-pR | 5'-AGTGCTGGGTAGATGCCAGT-3' | 20 | ||
EGFR-ex20-pF | 5'-TCCGACTCCTCCTTTATCCA-3' | 64 | 337 | 20 |
EGFR-ex20-pR | 5'-GATGGGACAGGCACTGATTT-3' | 20 | ||
EGFR-ex21-pF | 5'-AAGTTCAAGCCCAGGTCTCA-3' | 58 | 346 | 20 |
EGFR-ex21-pR | 5'-TCATTCACTGTCCCAGCAAG-3' | 20 | ||
KRAS |
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Kras-ex1-pF | 5'-AAAGGTACTGGTGGAGTATTTG-3' | 58 | 265 | 22 |
Kras-ex1-pR | 5'-TCTGTATCAAAGAATGGTCCTG-3' | 22 | ||
Kras-ex2-pF | 5'-TCTTTGGAGCAGGAACAATG-3' | 58 | 400 | 20 |
Kras-ex2-pR | 5'-TGCATGGCATTAGCAAAGAC-3' | 20 | ||
RASSF1A |
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RASSF1A-M-pF | 5'-CGAGAGCGCGTTTAGTTTCGTT-3' | 58 | 169 | 22 |
RASSF1A-M-pR | 5'-CGATTAAACCCGTACTTCGCTAA-3' | 23 | ||
RASSF1A-U-pF | 5'-GGGGGTTTTGTGAGAGTGTGTTT-3' | 58 | 169 | 23 |
RASSF1A-U-pR | 5'-CCCAATTAAACCCATACTTCACTAA-3' | 25 | ||
CDKN2A |
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CDKN2A-M-pF | 5'-GGGTTGTTTTCGGTTGGTGTTTTC-3' | 68 | 150 | 24 |
CDKN2A-M-pR | 5'-TCTAATAACCAACCAACCCCTCC-3' | 23 | ||
CDKN2A-U-pF | 5'-GTGAGGGTTGTTTTTGGTTGGTGTTTTT-3' | 68 | 151 | 28 |
CDKN2A-U-pR | 5'-TCTAATAACCAACCAACCCCTCC-3' | 23 | ||
APC |
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APC-5-Ex-pF | 5'-TGGGYGGGGTTTTGTGTTTTATT-3' | 56 | 136 | 23 |
APC-5-Ex-pR | 5'-TACRCCCACACCCAACCAATC-3' | 21 | ||
APC-5-M-pF | 5'-TATTGCGGAGTGCGGGTC-3' | 61 | 98 | 18 |
APC-5-M-pR | 5'-TCGACGAACTCCCGACGA-3' | 18 | ||
APC-5-U-pF | 5'-GTGTTTTATTGTGGAGTGTGGGTT-3' | 58 | 108 | 24 |
APC-5-U-pR | 5'-CCAATCAACAAACTCCCAACAA-3' | 22 | ||
CDH1 |
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CDH1-M-pF | 5'-GGTGAATTTTTAGTTAATTAGCGGTAC-3' | 55 | 204 | 27 |
CDH1-M-pR | 5'-CATAACTAACCGAAAACGCCG-3' | 21 | ||
CDH1-U-pF | 5'-GGTAGGTGAATTTTAGTTAATTAGTGGTA-3' | 55 | 211 | 29 |
CDH1-U-pR | 5'-ACCCATAACTAACCAAAAACACCA-3' | 24 | ||
GATA-4 |
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GATA-4-M-pF | 5'-GTATAGTTTCGTAGTTTGCGTTTAGC-3' | 60 | 136 | 26 |
GATA-4-M-pR | 5'-AACTCGCGACTCGAATCCCCG-3' | 21 | ||
GATA-4-U-pF | 5'-TTTGTATAGTTTTGTAGTTTGTGTTTAGT-3' | 60 | 142 | 29 |
GATA-4-U-pR | 5'-CCCAACTCACAACTCAAATCCCCA-3' | 24 | ||
GATA-5 |
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GATA-5-M-pF | 5'-AGTTCGTTTTTAGGTTAGTTTTCGGC-3' | 60 | 140 | 26 |
GATA-5-M-pR | 5'-CCAATACAACTAAACGAACGAACCG-3' | 25 | ||
GATA-5-U-pF | 5'-TGGAGTTTGTTTTTAGGTTAGTTTTTGGT-3' | 60 | 147 | 29 |
GATA-5-U-pR | 5'-CAAACCAATACAACTAAACAAACAAACCA-3' | 29 |