Primers | Sequence (5’-3’) | Reference |
CagPAI empty site | ||
468 HP519 496 HP549 | GCT TGC TTG TAT TGG CCT TG GCA TGC ACA TTC CCT AAA GTG | Achtman et al., 1999; Kersulyte et al., 1999 |
CagA phosphorylation motifs | ||
cagA28F | TTCTCAAAGGAGCAATTGGC | Argent et al., 2005 |
cagA-P1C | GTCCTGCTTTCTTTTTATTAACTTK AGC | |
cagA-P2CG | TTTAGCAACTTGAGCGTAAATGGG | |
cagA-P2TA | TTTAGCAACTTGAGTATAAATGGG | |
cagA-P3E | ATCAATTGTAGCGTAAATGGG | |
cagA-pD | TTGATTTGCCTCATCAAAATC | Jones et al., 2009 |