| 12 | A.39.1.5 | 1M46A | 148 | Myosin light chain MIc1p |
| 13 | A.39.1.5 | 1FPWA | 190 | Frequenin (neuronal calcium sensor 1) |
| 14 | A.45.1.1 | 1G6WA1 | 133 | Prion protein ure2p, nitrogen regulation fragment |
| 15 | A.45.1.1 | 1NHYA1 | 140 | Elongation factor 1-gamma, GST-like domain |
| 16 | A.45.1.2 | 2HQTA1 | 115 | GU4 nucleic-binding protein 1, Arc1p |
| 17 | A.47.2.1 | 1FIOA | 190 | Sso1 |
| 18 | A.60.8.2 | 1Y14A | 133 | RNA polymerase II subunit RBP4 (RpoF) |
| 19 | A.60.9.1 | 1FLOA1 | 123 | Flp recombinase |
| 20 | A.69.2.1 | 1FKMA1 | 194 | (A: 249 - 442) Ypt/Rab-GAP domain of gyp1p |
| 21 | A.69.2.1 | 1FKMA2 | 128 | (A: 443 - 630) Ypt/Rab-GAP domain of gyp1p |
| 22 | A.71.2.1 | 1M2OA1 | 103 | (A: 524 - 626) Sec23 |
| 23 | A.71.2.1 | 1M2VB1 | 107 | (B: 647 - 753) Sec24 |
| 24 | A.72.1.1 | 1DVKA | 149 | Functional domain of the splicing factor Prp18 |
| 25 | A.80.1.1 | 1SXJA1 | 146 | (A: 548 - 693) Replication factor C1 |
| 26 | A.93.1.1 | 1CYFA | 296 | Cytochrome c peroxidase |
| 27 | A.102.2.1 | 1DL2A | 510 | Class I alpha-1;2-mannosidase, catalytic domain |
| 28 | A.118.1.1 | 1WA5C | 937 | Exportin Cse1p |
| 29 | A.118.1.1 | 1WA5B | 463 | Karyopherin alpha |
| 30 | A.118.1.9 | 1HO8A | 447 | Regulatory subunit H of the V-type ATPase |
| 31 | A.118.1.14 | 1PAQA | 161 | Translation initiation factor eIF-2b epsilon |
| 32 | A.118.3.1 | 1RE0B | 195 | ARF guanine-exchange factor 1 |
| 33 | A.118.8.1 | 1Y8MA1 | 138 | Mitochondria fission protein Fis1 |
| 34 | A.118.8.1 | 1QQEA | 281 | Vesicular transport protein sec17 |
| 35 | A.118.9.4 | 1SZAA | 144 | PCF11 protein |
| 36 | A.118.17.2 | 2D2SA1 | 217 | (A: 525 - 753) Exocyst complex component EXO84 |
| 37 | A.118.17.2 | 2B7MA1 | 513 | (A: 73 - 623) Exocyst complex component EXO70 |
| 38 | A.130.1.2 | 1CSMA | 252 | Allosteric chorismate mutase |
| 39 | A.158.1.1 | 1NEXB1 | 100 | (B: 270 - 369) Cdc4 F-box and linker domains |
| 40 | A.160.1.1 | 1FA0A3 | 150 | (A: 202 - 351) Poly(A) polymerase, middle domain |
| 41 | A.207.1.1 | 1UX5A | 411 | Bni1 |
| 42 | A.210.1.1 | 1RF8B | 100 | Eukaryotic initiation factor 4f subunit eIF4g |
| 43 | A.227.1.1 | 1RP4A | 374 | Endoplasmic oxidoreductin 1, Ero1p |
| 44 | A.232.1.1 | 1XLYA | 224 | RNA-binding protein She2p |
| 45 | A.252.1.1 | 1YKEB1 | 119 | RNA polymerase II holoenzyme component SRB7 |