Primer name

Sequence (5'-3')

Length

Usage

Annealing temperature (˚C)

Oligo dT

CTGTGAATGCTGCGACTACGATTTTTTTTTTTTTTTTTTT

40 mer

cDNA synthesis

Chi3 F1 (F)

TGYTAYTTYACNAAYTGG

19 mer

Conserved region PCR

50.0

Chi3 F2 (F)

GAYATHGAYTGGGARTAYCC

19 mer

Chi3 R (R)

TTCCARTARTTCATNGCRTARTC

23 mer

3'RACE (R)

CTGTGAATGCGACTACGAT

19 mer

3' RACE PCR

50.0

Chi3 3' F1 (F)

AAGAGGAAGTCCTCTGGAGG

20 mer

Chi3 3' F2 (F)

GCTGAGGGAACAGCAACTGG

20 mer

Chi3 5' R1 (R)

GCAGCGGAGACCATTAATC

19 mer

5' RACE PCR

50.0

Chi3 5' R2 (R)

CCAGTTGCTGTTCCCTCA

18 mer

Chi3 5' F1 (F)

AGGAACCATTGATGCTGGTT

20 mer

Chi3 5' F2 (F)

TGGCAAAGTACCTGGACTT

19 mer

Chi3 5' F3 (F)

CGTGATGACGTATGACTTTCATG

23 mer

Chi3 5' P

GTGATGTCCTGTCACGCT

18 mer

Chi3 full F (F)

GACATGACAAGAGACCATCCAA

22 mer

Full length amplification

55.0

Chi3 full R (R)

ACAGAGCATTTCAAACAGAGGG

22 mer

β-actin (F)

GATCATGTTCGAGACCTTCAACAC

24 mer

Organ expression

50.0

β-actin (R)

TCCAATCCAGACAGAGTATTTAGC

24 mer

SmChi-1 (F)

ACTAGCGTGATCAAGTTCC

19 mer

SmChi-1 (R)

ACAGCTCCAATCGCGGA

17 mer

SmChi-2 (F)

CTCAGTCATTTAATTCCTGA

20 mer

SmChi-2 (R)

CCTGGCCAAGCTTGGGAAT

19 mer

SmChi-3 (F)

CAGTCTTCTGTCAACCTAC

19 mer

SmChi-3 (R)

GGTACTTTGCCATCTCTGC

19 mer