| TDF1 | Selective primer combination2 | Fragment size (bp) | Accession No | Organism or gene | E-value3 | Query cover4 | Identity5 | ||
| 24 hpi | |||||||||
| 45 | E-AAC/M1CGT | 100 | JN800037.1 | Retrotransposon complete sequence | 7.00E−12• | 53% | 93% | ||
| 52 | E-AAC/M2ACT | 300 | JX457396.1 | 23S ribosomal RNA (rrn23S) | 2.00E−60• | 79% | 100% | ||
| 63 | E-AAC/M2GAA | 330 | XM_002453856.1 | Hypothetical protein, mRNA | 7.00E−77• | 83% | 87% | ||
| 82 | E-ACG/M2ACT | 160 | XM_002444994.1 | Hypothetical protein, mRNA | 1.00E−51• | 83% | 93% | ||
| 48 hpi | |||||||||
| 29 | E-ACT/M1CTA | 220 | _ | None | _ | _ | _ | ||
| 41 | E-AAC/M1CGT | 450 | XP_002448166.1 | SORBIDRAFT_06g022385 | 1.00E−69† | 91% | 88% | ||
| 58 | E-AAC/M2TCG | 200 | XP_002467304.1 | SORBIDRAFT_01g024221 | 6.00E−08† | 37% | 84% | ||
| 78 | E-ACG/M2ACT | 350 | _ | None | _ | _ | _ | ||
| 72 hpi | |||||||||
| 14 | E-ACC/M1CTT | 280 | NP_001150511.1 | VQ motif family protein [Zea mays] | 1.00E−14† | 41% | 80% | ||
| 21 | E-ACT/M1CTT | 140 | XP_002455751.1 | SORBIDRAFT_03g023980 | 4.00E−14† | 47% | 65% | ||
| 28 | E-ACT/M1CTA | 300 | BT068454.2 | Zea mays full-length cDNA clone | 3.00E−31• | 31% | 92% | ||
| 34 | E-ACA/M1CTT | 290 | _ | None | _ | _ | _ | ||
| 81 | E-ACG/M2ACT | 180 | AE009947.2 | Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome | 4.00E−72• | 83% | 100% | ||