rs3737549 | GC | 4 | 72631668 | G | A | 0.208 | 0.219 | Haploview Tagger | rs3737549 | 650Y | ||
rs3755967 | GC | 4 | 72609398 | C | T | 0.094 | 0.04 | Haploview Tagger | rs3755967 | Sequenom | In complete LD with rs2282679 (Wang et al. 2010) | |
rs3782905 | VDR | 12 | 48266167 | G | C | 0.217 | PharmGKB | rs3782905 | Sequenom | Failed Sequenom | ||
rs3819545 | VDR | 12 | 48265006 | A | G | 0.302 | 0.221 | Haploview Tagger | rs3819545 | 650Y | ||
rs41400444 | RXRA | 9 | 137231651 | G | T | 0.075 | 0.098 | Haploview Tagger | No snps in LD | Failed Sequenom assay design | ||
rs4364228 | GC | 4 | 72623347 | A | G | 0.396 | 0.468 | Haploview Tagger | rs4364228 | 650Y | ||
rs4646536 | CYP27B1 | 12 | 58157988 | A | G | 0.368 | 0.27 | Haploview Tagger | rs703842 | 0.876 | 650Y | LD with SNP on original list |
rs4646537 | CYP27B1 | 12 | 58157281 | T | G | 0.075 | 0.097 | Haploview Tagger | rs4646537 | 650Y | ||
rs4917352 | RXRA | 9 | 137232030 | T | C | 0.528 | 0.58 | Haploview Tagger | rs4917352 | Sequenom | ||
rs4917354 | RXRA | 9 | 137237661 | C | T | 0.453 | 0.5 | Haploview Tagger | rs4917354 | 650Y | ||
rs6817912 | GC | 4 | 72653705 | C | T | 0.094 | 0.121 | Haploview Tagger | rs6817912 | Sequenom | ||
rs7039190 | RXRA | 9 | 137266704 | A | C | 0.104 | 0.17 | Haploview Tagger | rs7039190 | 650Y | ||
rs7041 | GC | 4 | 72618334 | A | C | 0.179 | 0.088 | Haploview Tagger | rs7041 | 650Y | Ahn et al. 2010 | |
rs7048602 | RXRA | 9 | 137253447 | G | A | 0.387 | 0.527 | Haploview Tagger | rs7048602 | Sequenom | ||
rs705117 | GC | 4 | 72608115 | C | T | 0.298 | 0.155 | Haploview Tagger | rs705117 | 650Y | ||
rs705119 | GC | 4 | 72613036 | A | C | 0.179 | 0.097 | Haploview Tagger | rs705119 | Sequenom | ||
rs705120 | GC | 4 | 72614140 | A | C | 0.547 | 0.496 | Haploview Tagger | rs705120 | Sequenom | ||
rs731236 | VDR | 12 | 48238757 | A | G | 0.236 | 0.288 | PharmGKB | rs731236 | Sequenom | TaqI | |
rs739837 | VDR | 12 | 48238221 | G | T | 0.557 | 0.588 | Haploview Tagger | rs739837 | 650Y | ||
rs757343 | VDR | 12 | 48239675 | C | T | 0.113 | 0.062 | Haploview Tagger | rs757343 | 650Y | ||
rs7853934 | RXRA | 9 | 137252760 | C | T | 0.292 | 0.288 | Haploview Tagger | rs7853934 | Sequenom | ||
rs7855881 | RXRA | 9 | 137220543 | G | T | 0.179 | 0.221 | Haploview Tagger | rs7855881 | Sequenom | ||
rs7954412 | VDR | 12 | 48237287 | T | C | 0.085 | 0.071 | Haploview Tagger | rs7967673 | 1 | 650Y | LD with SNP on original list |
rs7962898 | VDR | 12 | 48242837 | C | T | 0.34 | 0.336 | Haploview Tagger | rs7962898 | Sequenom | ||
rs7965281 | VDR | 12 | 48231610 | A | G | 0.358 | 0.385 | Haploview Tagger | rs7965281 | Sequenom | ||
rs7967152 | VDR | 12 | 48244184 | A | C | 0.623 | 0.615 | Haploview Tagger | rs7967152 | 650Y |