SSR loci

Allele richness

Allele size

range (bp)

Rare alleles

(≤1%)

Common

alleles

(1 to ≤20%)

Most

frequent

alleles (>20%)

PIC

Gene diversity

Heterozygosity

Xpsmp2045

10

21 (195 - 216)

7

1

2

0.51 (0.37, 0.54)

0.59 (0.41, 0.60)

0.02 (0.01, 0.03)

Xpsmp2068

23

42 (99 - 141)

10

12

1

0.87 (0.76, 0.89)

0.88 (0.78, 0.90)

0.03 (0.04, 0.02)

Xpsmp2077

9

40 (138 - 178)

3

4

2

0.51 (0.47, 0.43)

0.58 (0.56, 0.46)

0.12 (0.08, 0.15)

Xpsmp2079

33

121 (138 - 259)

11

22

0

0.91 (0.85, 0.94)

0.92 (0.86, 0.94)

0.04 (0.02, 0.06)

Xpsmp2089

20

30 (103 - 133)

4

15

1

0.88 (0.78, 0.91)

0.89 (0.81, 0.92)

0.05 (0.07, 0.04)

Xpsmp2090

10

20 (171 - 191)

2

6

2

0.74 (0.70, 0.77)

0.78 (0.74, 0.79)

0.008 (0.01, 0.01)

Xpsmp2201

10

4 (332 - 336)

2

6

2

0.66 (0.50, 0.75)

0.70 (0.59, 0.78)

0.02 (0.01, 0.03)

Xpsmp2202

4

18 (145 - 163)

0

1

3

0.59 (0.59, 0.59)

0.66 (0.67, 0.65)

0.03 (0.02, 0.04)

Xpsmp2203

19

37 (335 - 372)

4

13

2

0.86 (0.66, 0.91)

0.87 (0.70, 0.92)

0.03 (0.01, 0.06)

Xpsmp2204

11

94 (173 - 267)

3

7

1

0.58 (0.26, 0.77)

0.60 (0.30, 0.80)

0.02 (0.01, 0.03)

Xpsmp2209

12

23 (337 - 360)

4

5

3

0.82 (0.79, 0.79)

0.84 (0.81, 0.81)

0.07 (0.04, 0.10)

Xpsmp2218

40

59 (217 - 276)

19

21

0

0.93 (0.87, 0.94)

0.93 (0.88, 0.94)

0.03 (0.01, 0.05)

Xpsmp2220

12

24 (108 - 132)

4

7

1

0.70 (0.41, 0.83)

0.72 (0.43, 0.85)

0.04 (0.01, 0.07)

Xpsmp2222

5

8 (152 - 160)

0

4

1

0.26 (0.23, 0.30)

0.28 (0.24, 0.31)

0.05 (0.08, 0.02)

Xpsmp2227

5

15 (194 - 209)

2

2

1

0.28 (0.25, 0.30)

0.31 (0.28, 0.34)

0.02 (0.01, 0.03)

Xpsmp2232

16

24 (226 - 250)

7

7

2

0.77 (0.65, 0.78)

0.80 (0.69, 0.80)

0.02 (0.02, 0.02)

Xpsmp2237

10

56 (202 - 258)

5

4

1

0.56 (0.21, 0.73)

0.60 (0.22, 0.77)

0.04 (0.03, 0.04)

Xpsmp2246

4

6 (258 - 264)

0

2

2

0.68 (0.56, 0.70)

0.73 (0.63, 0.75)

0.03 (0.03, 0.02)

Xpsmp2248

6

10 (162 - 172)

0

4

2

0.70 (0.73, 0.64)

0.74 (0.77, 0.69)

0.02 (0.03, 0.02)

Xpsmp2249

6

31 (129 - 160)

2

3

1

0.39 (0.26, 0.49)

0.43 (0.28, 0.55)

0.02 (0.01, 0.03)

Xpsmp2273

19

62 (158 - 220)

9

9

1

0.77 (0.71, 0.79)

0.78 (0.73, 0.81)

0.04 (0.02, 0.05)

Xipes3002

10

14 (197 - 211)

4

5

1

0.65 (0.63, 0.65)

0.68 (0.67, 0.69)

0.05 (0.02, 0.07)

Xipes3032

6

15 (180 - 195)

2

2

2

0.63 (0.57, 0.57)

0.68 (0.63, 0.64)

0.07 (0.05, 0.08)

Xipes3048

4

6 (244 - 250)

0

2

2

0.49 (0.47, 0.50)

0.57 (0.56, 0.57)

0.008 (0.017, 0)

Xipes3080

7

15 (211 - 226)

3

2

2

0.63 (0.57, 0.58)

0.68 (0.62, 0.64)

0.05 (0.03, 0.04)

Xipes3088

11

24 (144 - 168)

2

8

1

0.83 (0.77, 0.80)

0.85 (0.80, 0.82)

0.03 (0.05, 0.01)

CTM10

17

32 (167 - 199)

3

13

1

0.78 (0.46, 0.91)

0.80 (0.50, 0.91)

0.05 (0.01, 0.10)

CTM12

16

25 (318 - 343)

5

9

2

0.75 (0.64, 0.77)

0.78 (0.67, 0.80)

0.03 (0.04, 0.02)

Total

355

117

196

42

Mean

12.68

4.18

7

1.5

0.67 (0.56, 0.70)

0.70 (0.60, 0.73)

0.04 (0.03, 0.05)