SSR loci | Allele richness | Allele size range (bp)‡ | Rare alleles (≤1%) | Common alleles (1 to ≤20%) | Most frequent alleles (>20%) | PIC† | Gene diversity† | Heterozygosity† |
Xpsmp2045 | 10 | 21 (195 - 216)‡ | 7 | 1 | 2 | 0.51 (0.37, 0.54) | 0.59 (0.41, 0.60) | 0.02 (0.01, 0.03) |
Xpsmp2068 | 23 | 42 (99 - 141) | 10 | 12 | 1 | 0.87 (0.76, 0.89) | 0.88 (0.78, 0.90) | 0.03 (0.04, 0.02) |
Xpsmp2077 | 9 | 40 (138 - 178) | 3 | 4 | 2 | 0.51 (0.47, 0.43) | 0.58 (0.56, 0.46) | 0.12 (0.08, 0.15) |
Xpsmp2079 | 33 | 121 (138 - 259) | 11 | 22 | 0 | 0.91 (0.85, 0.94) | 0.92 (0.86, 0.94) | 0.04 (0.02, 0.06) |
Xpsmp2089 | 20 | 30 (103 - 133) | 4 | 15 | 1 | 0.88 (0.78, 0.91) | 0.89 (0.81, 0.92) | 0.05 (0.07, 0.04) |
Xpsmp2090 | 10 | 20 (171 - 191) | 2 | 6 | 2 | 0.74 (0.70, 0.77) | 0.78 (0.74, 0.79) | 0.008 (0.01, 0.01) |
Xpsmp2201 | 10 | 4 (332 - 336) | 2 | 6 | 2 | 0.66 (0.50, 0.75) | 0.70 (0.59, 0.78) | 0.02 (0.01, 0.03) |
Xpsmp2202 | 4 | 18 (145 - 163) | 0 | 1 | 3 | 0.59 (0.59, 0.59) | 0.66 (0.67, 0.65) | 0.03 (0.02, 0.04) |
Xpsmp2203 | 19 | 37 (335 - 372) | 4 | 13 | 2 | 0.86 (0.66, 0.91) | 0.87 (0.70, 0.92) | 0.03 (0.01, 0.06) |
Xpsmp2204 | 11 | 94 (173 - 267) | 3 | 7 | 1 | 0.58 (0.26, 0.77) | 0.60 (0.30, 0.80) | 0.02 (0.01, 0.03) |
Xpsmp2209 | 12 | 23 (337 - 360) | 4 | 5 | 3 | 0.82 (0.79, 0.79) | 0.84 (0.81, 0.81) | 0.07 (0.04, 0.10) |
Xpsmp2218 | 40 | 59 (217 - 276) | 19 | 21 | 0 | 0.93 (0.87, 0.94) | 0.93 (0.88, 0.94) | 0.03 (0.01, 0.05) |
Xpsmp2220 | 12 | 24 (108 - 132) | 4 | 7 | 1 | 0.70 (0.41, 0.83) | 0.72 (0.43, 0.85) | 0.04 (0.01, 0.07) |
Xpsmp2222 | 5 | 8 (152 - 160) | 0 | 4 | 1 | 0.26 (0.23, 0.30) | 0.28 (0.24, 0.31) | 0.05 (0.08, 0.02) |
Xpsmp2227 | 5 | 15 (194 - 209) | 2 | 2 | 1 | 0.28 (0.25, 0.30) | 0.31 (0.28, 0.34) | 0.02 (0.01, 0.03) |
Xpsmp2232 | 16 | 24 (226 - 250) | 7 | 7 | 2 | 0.77 (0.65, 0.78) | 0.80 (0.69, 0.80) | 0.02 (0.02, 0.02) |
Xpsmp2237 | 10 | 56 (202 - 258) | 5 | 4 | 1 | 0.56 (0.21, 0.73) | 0.60 (0.22, 0.77) | 0.04 (0.03, 0.04) |
Xpsmp2246 | 4 | 6 (258 - 264) | 0 | 2 | 2 | 0.68 (0.56, 0.70) | 0.73 (0.63, 0.75) | 0.03 (0.03, 0.02) |
Xpsmp2248 | 6 | 10 (162 - 172) | 0 | 4 | 2 | 0.70 (0.73, 0.64) | 0.74 (0.77, 0.69) | 0.02 (0.03, 0.02) |
Xpsmp2249 | 6 | 31 (129 - 160) | 2 | 3 | 1 | 0.39 (0.26, 0.49) | 0.43 (0.28, 0.55) | 0.02 (0.01, 0.03) |
Xpsmp2273 | 19 | 62 (158 - 220) | 9 | 9 | 1 | 0.77 (0.71, 0.79) | 0.78 (0.73, 0.81) | 0.04 (0.02, 0.05) |
Xipes3002 | 10 | 14 (197 - 211) | 4 | 5 | 1 | 0.65 (0.63, 0.65) | 0.68 (0.67, 0.69) | 0.05 (0.02, 0.07) |
Xipes3032 | 6 | 15 (180 - 195) | 2 | 2 | 2 | 0.63 (0.57, 0.57) | 0.68 (0.63, 0.64) | 0.07 (0.05, 0.08) |
Xipes3048 | 4 | 6 (244 - 250) | 0 | 2 | 2 | 0.49 (0.47, 0.50) | 0.57 (0.56, 0.57) | 0.008 (0.017, 0) |
Xipes3080 | 7 | 15 (211 - 226) | 3 | 2 | 2 | 0.63 (0.57, 0.58) | 0.68 (0.62, 0.64) | 0.05 (0.03, 0.04) |
Xipes3088 | 11 | 24 (144 - 168) | 2 | 8 | 1 | 0.83 (0.77, 0.80) | 0.85 (0.80, 0.82) | 0.03 (0.05, 0.01) |
CTM10 | 17 | 32 (167 - 199) | 3 | 13 | 1 | 0.78 (0.46, 0.91) | 0.80 (0.50, 0.91) | 0.05 (0.01, 0.10) |
CTM12 | 16 | 25 (318 - 343) | 5 | 9 | 2 | 0.75 (0.64, 0.77) | 0.78 (0.67, 0.80) | 0.03 (0.04, 0.02) |
Total | 355 |
| 117 | 196 | 42 |
|
|
|
Mean | 12.68 |
| 4.18 | 7 | 1.5 | 0.67 (0.56, 0.70) | 0.70 (0.60, 0.73) | 0.04 (0.03, 0.05) |