Viruses | Primer | Sequence(5’-3’) | Position (nt) | Size (bp) | Reference |
Norovirus GI
| GI-F1M | CTGCCCGAATTYGTAAATGAT | 5336-5359 | 314 | [12] |
GI-R1M | CCAACCCARCCATTRTACATYTG | 5643-5665 | |||
GI-F2 | ATGATGATGGCGTCTAAGGACGC | 5352-5374 | |||
Norovirus GII
| GII-F1M | GGGAGGGCGATCGCAATCT | 5049-5067 | 313 | [12] |
GII-R1M | CCRCCIGCATRICCRTTRTACAT | 5367-5389 | |||
GII-F3M | TTGTGAATGAAGATGGCGTCGART | 5077-5100 | |||
Astrovirus
| Mon340 | CGTCATTATTTGTTGTCATACT | 1182-1203 | 289 | [13] |
Mon348 | ACATGTGCTGCTGTTACTATG | 1450-1470 | |||
Sapovirus
| SLV5317 | CTCGCCACCTACRAWGCBTGGTT | 5083-5105 | 434 | [14] |
SLV5749 | CGGRCYTCAAAVSTACCBCCCCA | 5516-5494 | |||
Hepatitis A virus
| BR-9b | AGTCACACCTCTCCAGGAAAACTT | 2950-2972 | 361 | [15] |
BR-5b | TTGTCTGTCACAGAACAATCAG | 3310-3333 | |||
RJ-3c | TCCCAGAGCTCCATTGAA | 2984-3001 | 234 | ||
Br-6b | AGGAGGTGGAAGCACTTCATTTGA | 3217-3240 |