Primer ID | Primer sequences | SNP type | SNP Position | Ho | He | MAF | PIC | PHWE |
SNP1 | F: GTGCCGATGTTTATATCAGGCG R: cacatttctggttcgggctc | AT | 97 | 0.3750 | 0.5060 | 0.3125 | 0.374 | 0.1368 |
SNP2 | F: AATTCTGGTCCGGCAACAA R: agcccgagatgaacagagac | AG | 118 | 0.3125 | 0.3095 | 0.3125 | 0.271 | 0.9550 |
SNP3 | F: TGCAGGTGAACATAGATTTCCAG R: tgctcctctgatgatggca | AG | 104 | 0.2188 | 0.2892 | 0.2188 | 0.244 | 0.1510 |
SNP4 | F: TCTTGTCCCTCCACTGTTGC R: tccggtcacaacttccacc | AG | 95 | 0.2500 | 0.3472 | 0.2500 | 0.283 | 0.1022 |
SNP5 | F: TCAAACAGGGAGAAACGGC R: Ttaccacttgaagagactccc | AG | 73 | 0.5938 | 0.5074 | 0.1875 | 0.375 | 0.3283 |
SNP6 | F: GGAACGTAGGGGAGTTGAGC R: CACGCACATACGCACATACG | TG | 86 | 0.2500 | 0.2679 | 0.2500 | 0.229 | 0.6929 |
SNP7 | F: TTCCCAGGTAAAGCCAAGC R: aatacctcctcgctactcg | AC | 106 | 0.5312 | 0.4479 | 0.4063 | 0.349 | 0.2828 |
SNP8 | F: AAGTGTTCATCCGCTGGCTTA R: tcattgtaggtagcccacacg | AC | 90 | 0.6562 | 0.4836 | 0.2813 | 0.363 | 0.0400* |
SNP9 | F: GTTAAACTGAATATCAACAGGTG R: aactttgtaaagtgtcctgg | TG | 67 | 0.3750 | 0.3810 | 0.375 | 0.305 | 0.9277 |
SNP10 | F: TGTTTGTGTTGCCACTATCAG R: GCtcaatgtcttgaactggg | AC | 64 | 0.4688 | 0.5035 | 0.3125 | 0.373 | 0.6917 |
SNP11 | F: TGTTAACGTTTCGGCCTGCTAG R: agcaggaagtcaacccacg | AC | 76 | 0.4375 | 0.3472 | 0.4375 | 0.283 | 0.1291 |
SNP12 | F: TTCTCTGTTACAGCAGCGC R: caatgatagcacaggcagc | AG | 95 | 0.4688 | 0.5074 | 0.2500 | 0.374 | 0.6612 |
SNP13 | F: TCTGACTGACATCGTGGATCAC R: atgttctcaggttgcatcagg | CT | 70 | 0.2500 | 0.4365 | 0.2500 | 0.337 | 0.0136* |
SNP14 | F: CGTAGGCTGTTGCGTCTC R: Tgtgcacaagtataggctgc | CT | 78 | 0.2188 | 0.4241 | 0.2188 | 0.330 | 0.0051* |
SNP15 | F: ATTCAGCAGTGGACTTGGGG R: TTCACTCTTTCCCGGGCTTC | CT | 118 | 0.1875 | 0.3095 | 0.1875 | 0.258 | 0.0206* |
SNP16 | F: TCTACTATGACGCTGTTACTCCAG R: atggtcaagtcatcagtggc | AG | 83 | 0.2812 | 0.3289 | 0.2813 | 0.271 | 0.3967 |
SNP17 | F: ACACGATACTGCTTTGTCAC R: Gcttctagattagcttagcgc | CT | 81 | 0.3125 | 0.3810 | 0.2813 | 0.305 | 0.2964 |
SNP18 | F: ATGGATTTGCAGCACGGTTG R: AGCTAAAACTGGCACGCTCA | AG | 102 | 0.3750 | 0.5060 | 0.2500 | 0.374 | 0.1368 |
SNP19 | F: CACTGGTGTGTTTGTGTCAAGG R: tccagcaccatcatcaggtc | TG | 67 | 0.3438 | 0.5074 | 0.3438 | 0.375 | 0.0637 |
SNP20 | F: AAGAGAGAAAATACCAACACTG R: aaatgatcctggtccttgc | AG | 70 | 0.5312 | 0.5035 | 0.2500 | 0.373 | 0.7511 |
SNP21 | F: CGTTGGTTGTTAAGTGGCAG R: caactaaggcagaagagatagacc | AG | 64 | 0.5000 | 0.5079 | 0.2500 | 0.375 | 0.9284 |
SNP22 | F: TTGGTTTTTGACGGTGTCGC R: GGTGGAGTGGCTGTGATTCT | CT | 99 | 0.4375 | 0.5079 | 0.2500 | 0.375 | 0.4255 |
SNP23 | F: AGAGTGCTGAAGCCTCAACTG R: acgtgatggaaagggacactg | TG | 70 | 0.2812 | 0.3289 | 0.2813 | 0.271 | 0.3967 |
SNP24 | F: TTCGGTTACGCGGGAGTTTGTC R: gtggaacccacagggtaacgtc | CT | 117 | 0.4062 | 0.4836 | 0.4063 | 0.363 | 0.3570 |
SNP25 | F: AGAGTCAAGACTAAGCGCG R: ctgtgtgagtttttggtggc | CT | 102 | 0.3438 | 0.4479 | 0.3438 | 0.344 | 0.1794 |
SNP26 | F: CTGCCGTGACGAGTTCAGAT R: TGTGCGATCGTGTGACAGAA | CT | 71 | 0.4688 | 0.4678 | 0.4063 | 0.354 | 0.9902 |
SNP27 | F: CATAACGGACAAGAAAAATGCCTC R: ttaaccagtgactgtctggac | CT | 74 | 0.5625 | 0.4762 | 0.3438 | 0.359 | 0.2965 |
SNP28 | F: ACCGTGTGCTTTCAGTTCCTG R: Gtaacactggagggtggagc | CT | 100 | 0.5312 | 0.4678 | 0.3750 | 0.354 | 0.4340 |
SNP29 | F: GCCACATTCTACACACTGTCCC R: tcagcagacgacaatgcagc | CT | 75 | 0.3438 | 0.4479 | 0.3438 | 0.344 | 0.1794 |
SNP30 | F: TCCTTCTCTGGAGTCTTTGTGC R: TGTGTTTTGAGGTTTTTGCAAGC | CT | 74 | 0.3750 | 0.4107 | 0.3750 | 0.330 | 0.6145 |
SNP31 | F: CTCTCCAAGCCTCAGCGAG R: ACTTCCTCTCCTCCACTGCA | AG | 113 | 0.5000 | 0.4901 | 0.3125 | 0.366 | 0.9073 |
SNP32 | F: CAGGTCTCAAGCTCACCCTGG R: actacttgcggatcacttgttgcc | TG | 94 | 0.3125 | 0.3095 | 0.3125 | 0.258 | 0.9550 |
SNP33 | F: AGCATTGCTTGATAATGACTGCC R: agcgaatatctgcgaaacgg | AT | 98 | 0.5000 | 0.5079 | 0.2188 | 0.375 | 0.9284 |
SNP34 | F: GCTGCCACAGTCACAGTTTCAC R: tcaggtcctcagcatcaacgg | AG | 72 | 0.2500 | 0.4583 | 0.2500 | 0.349 | 0.0087* |
SNP35 | F: AGATGCAAGAGGGCCACTTCC R: agggatagaggctgacgcctg | CT | 103 | 0.1875 | 0.3095 | 0.1875 | 0.258 | 0.0206* |